Showing : Biophysics • reset
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Job: Flatiron Research Fellow, Structural and Molecular Biophysics
Biophysics
4.0 years ago simonsF.careers • 0
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DEG Calling on Transcripts vs Genes
Biophysics limma Biophysics limma
12.2 years ago Yogesh Saletore ▴ 10
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xzfile() cannot open the connection, lzma encoder error 5.
Biophysics Biophysics
12.8 years ago Wang Ming ▴ 20
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xzfile() cannot open the connection, lzma encoder error 5.
Biophysics Biophysics
updated 12.8 years ago by ★ 1.2k • written 12.8 years ago by ▴ 20
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importing data problem with methyAnalysis package
Biophysics Annotation Preprocessing annotate lumi methyAnalysis Biophysics Annotation lumi
13.0 years ago Pan Du ▴ 440
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R: How to prpare the input data to writeFASTA ? Examples of CharacterToFASTArecords ...
Biophysics Biophysics
16.5 years ago mauede@alice.it ▴ 870
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R: R: how to use writeFASTA in modality "append"
Biophysics Biophysics
16.5 years ago mauede@alice.it ▴ 870
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R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics Homo sapiens biomaRt PING miRNA Biophysics Homo sapiens biomaRt PING
updated 16.6 years ago by ★ 3.4k • written 16.6 years ago by ▴ 870
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R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics Biostrings biomaRt miRNA Biophysics Biostrings biomaRt
16.6 years ago mauede@alice.it ▴ 870
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R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics GO Homo sapiens Biostrings biomaRt miRNA Biophysics GO Homo sapiens
16.6 years ago michael watson IAH-C ★ 3.4k
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R: R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics GO Homo sapiens Biostrings biomaRt miRNA Biophysics GO Homo sapiens
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 870
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R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
Biophysics Biophysics
16.6 years ago mauede@alice.it ▴ 870
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1.4k
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SAM warning
Biophysics Alignment Annotation Normalization Cancer hgu133plus2 probe affy vsn MBCB vsn
17.0 years ago elliot harrison ▴ 230
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Filtering before differential expression analysis of microarrays - New paper out
Biophysics Normalization affy vsn Biophysics Normalization affy vsn
17.0 years ago Steve Lianoglou ★ 13k
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Preprocessing affymetrix array data
Biophysics Biophysics
17.3 years ago Abdi Ali ▴ 20
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1.3k
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Bizarre artifacts in MA plots for ChIP-chip data
Microarray Biophysics Microarray Biophysics
updated 17.3 years ago by ★ 2.4k • written 17.3 years ago by ★ 13k
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1.2k
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Help with creating a figure
Biophysics Biophysics
updated 17.6 years ago by ▴ 340 • written 17.6 years ago by ★ 13k
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Ph.D / Postdoctoral Position in Bioinformatics at Johannes Kepler University Linz, Austria
SNP Microarray Biophysics Classification SNP Microarray Biophysics Classification
19.7 years ago Birgit Hauer ▴ 30
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Postdoc Position in Bioinformatics at Johannes Kepler University Linz, Austria
SNP Microarray Biophysics Classification SNP Microarray Biophysics Classification
19.9 years ago Birgit Hauer ▴ 30
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Ph.D Positions in Bioinformatics at Johannes Kepler University Linz, Austria
SNP Microarray Biophysics Classification SNP Microarray Biophysics Classification
19.9 years ago Birgit Hauer ▴ 30
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1.6k
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ReadAffy problems
Genetics Biophysics affy Genetics Biophysics affy
updated 22.7 years ago by ★ 2.3k • written 22.7 years ago by ▴ 30
21 results • Page 1 of 1
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Comment: Ensembl site unresponsive via biomaRt by sebastianenewell • 0
> I think this is an unrelated issue. The original post includes the > message Error: 'curl_parse_url' is not an exported object from > 'na…
Comment: Development of MSstat workflow to analyze DIA time series data by Gordon Smyth 53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
Comment: Clarification on counting in Rsubread (featureCounts) by Gordon Smyth 53k
Your follow-up question is very much wider than the first, and is essentially a research question rather a software question. As one of the…
Comment: Error in creating BSGenome package by Nguyen • 0
I keep running into this error, please help: ``` Writing all sequences to './BSgenome.Panubis.NCBI.Panubis1.0/inst/extdata/single_sequenc…
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
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Popular Question to mohammedtoufiq91 ▴ 10
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Commentator to James W. MacDonald 68k
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Popular Question to Gordon Smyth 53k
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