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Biostrings
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DNAString: Standard checksum function?
Biostrings
FASTA
sequencing
8.2 years ago • updated 7 days ago
Henrik Bengtsson
★ 2.4k
2
votes
6
replies
789
views
Biostrings error at retrieving protein sequences
SequenceMatching
Biostrings
DifferentialExpression
Proteome
updated 7 months ago by
Hervé Pagès
16k • written 7 months ago by
nromerov
• 0
0
votes
2
replies
715
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Probe off-target prediction: Identifying short sequence matches - potentially with mismatches & indels - in a transcriptome
Microarray
Alignment
Biostrings
written 12 months ago by
sandmann.t
▴ 70
1
vote
3
replies
548
views
AAbin vs DNAbin structures
Biostrings
updated 8 months ago by
James W. MacDonald
65k • written 8 months ago by
rogerb
• 0
1
vote
5
replies
445
views
Biostrings: read*StringSet() functions leave open file handles
Biostrings
9 weeks ago • updated 8 weeks ago
Gerhard Thallinger
▴ 180
2
votes
2
replies
241
views
From a DNAStringSet to a data.frame
Biostrings
6 weeks ago
ramiro.barrantes
▴ 10
0
votes
3
replies
201
views
Store output of matchPWM()
biostrings
Biostrings
updated 12 days ago by
James W. MacDonald
65k • written 12 days ago by
mat149
▴ 70
0
votes
0
replies
171
views
How to search for a string in a DNAStringSet dataset?
Biostrings
3 months ago
Angela Michalichyn
• 0
0
votes
1
reply
146
views
Trimming a section of a scaffold from a genome
Biostrings
GenomeAssembly
updated 6 weeks ago by
James W. MacDonald
65k • written 6 weeks ago by
Karen
• 0
9 results • Page
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Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
alex.pico
▴ 20
Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …
Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
by
bandconductor
• 0
thanks! you have saved me so much time
Comment: Problem finding certain variables when importing a public database GSE73103
by
Guido Hooiveld
★ 3.9k
FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…
Votes
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
A: DEXSeq time course design
using variable in design formula
differential expression for Single-cell RNAseq data using edgeR
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