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Recent ...
Replies
Comment: DuplicateCorrelation() block by duplicate sample or by cell line ?
by
Gimena
•
0
Hi James,
Yes, these are complete cases. every line has all the treatment groups and technical replicates.
Comment: DuplicateCorrelation() block by duplicate sample or by cell line ?
by
Gimena
•
0
I am sorry for the confusion. It goes like this:
3 drug exposures (vehicle, low and high dose) x 2 replicates per condition: technical re…
Comment: How does Deseq2 deal with the row with zero when calculating size factors
by
jiakang
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0
Thanks for your quick reply. I understand and have noticed the code you mentioned above.
> the size factors results of sfType = "poscount…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
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0
Yes. I considered genome wide p value as cutoff.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
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It sounds like you have more overlaps than by chance, is that what you would like to see?
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