Bioconductor Proteome

Showing : Proteome • reset

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418

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Proteomics ProteoMM ProteomicsWorkflow Proteome

written 13 months ago by ary.lech ▴ 10

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1.2k

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SequenceMatching Biostrings DifferentialExpression Proteome

updated 15 months ago by Hervé Pagès 16k • written 15 months ago by nromerov • 0

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637

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Proteome ProtGenerics

written 2.3 years ago by bansalheena10 • 0

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753

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Proteomics Proteome

updated 2.3 years ago by ATpoint ★ 4.6k • written 2.3 years ago by bansalheena10 • 0

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941

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shotgunproteomics Proteome proteomics Proteomics ProteoMM

2.9 years ago ary.lech ▴ 10

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3.7k

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MassSpectrometryData Proteome Database DEP

3.9 years ago • updated 3.8 years ago tpm • 0

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1.8k

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ProteomicsWorkflow proteomics Proteome

4.1 years ago info ▴ 10

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1.3k

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Proteome ProteomicsWorkflow proteomics

updated 4.2 years ago by swbarnes2 ★ 1.4k • written 4.2 years ago by yueli7 ▴ 20

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2.6k

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Genetics Normalization Proteome DESeq Genetics Normalization Proteome DESeq

updated 13.5 years ago by Davis McCarthy ▴ 20 • written 13.5 years ago by mali salmon ▴ 370

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931

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Proteome Proteome

15.3 years ago Tillinghast, Guy, M.D. ▴ 30

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1.8k

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Proteome Proteome

updated 17.5 years ago by Mª José Nueda ▴ 90 • written 17.5 years ago by simonegri@alice.it ▴ 20

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Answer: Curiously shaped volcano plot with using oarfish + swish to do differential gene by Michael Love 43k

See swish vignette, these are explained.

Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Great thanks for posting the issue and sticking with it Annaleigh

Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0

Awesome possum! Update works!! Thank you so much for the help and guidance!

Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal by iqratechnology4 • 0

Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/

Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt? by James W. MacDonald 67k

> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…

Votes

Answer: Error in download.file for TCGAutils::symbolsToRanges

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Answer: Limma Interaction Effect with Covariates

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