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ChIPSeqData
•
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0
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74
views
need help with Diffbind multiple groups
DiffBind
ChIPSeqData
8 days ago
Dinesh
• 0
1
vote
1
reply
147
views
Fold change calculation in Diffbind vs. DESEQ2?
DiffBind
ChIPSeqData
DESeq2
updated 15 days ago by
Michael Love
42k • written 15 days ago by
marcusn
• 0
0
votes
1
reply
2.0k
views
bwa mem2 index genome - chipseq analysis
Genome
bwamem
ChIPSeqData
index
updated 14 months ago by
ATpoint
★ 4.1k • written 14 months ago by
Maka
• 0
0
votes
2
replies
788
views
New to ChipSeq getting 0 peaks using dba()
ChipSeq
ChIPSeqData
chipseqDB
17 months ago
stacy.genovese
• 0
0
votes
3
replies
1.0k
views
CountOverlap
GeneExpression
ChIPSeqData
updated 19 months ago by
James W. MacDonald
65k • written 19 months ago by
michela
▴ 20
0
votes
2
replies
2.2k
views
DiffBind bUseSummarizeOverlaps error - the rownames and colnames of the supplied assay(s) must be NULL or identical to those of the SummarizedExper…
DiffBind
ChIPSeqData
updated 23 months ago by
millerh1
▴ 10 • written 2.5 years ago by
sfpacman
• 0
0
votes
0
replies
518
views
ChIPpeakAnno: No seqlevelsStyle compatible entry
ChIPSeqData
2.5 years ago
tom.dean
• 0
5
votes
3
replies
1.4k
views
importing BED with non-integer values
ChIPseeker
ChIPSeqData
updated 3.5 years ago by
James W. MacDonald
65k • written 3.5 years ago by
Morris
▴ 10
8 results • Page
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Recent ...
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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Marcel Ramos
690
`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…
Comment: error running enricher from clusterprofiler
by
Yael
• 0
It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Votes
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
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