Bioconductor ChemmineR

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Cheminformatics ChemmineR ChemmineDrugs

15 months ago Sean • 0

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cheminf ChemmineOB Cheminformatics ChemmineR

3.3 years ago adelenelai • 0

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ChemmineR Chemmin ChemmineOB

3.6 years ago sukissqz • 0

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ChemmineR ChemmineOB

updated 3.8 years ago by Thomas Girke ★ 1.7k • written 4.0 years ago by teresadijor • 0

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ChemmineR Chemistry

updated 5.7 years ago by khoran ▴ 10 • written 5.8 years ago by Anthony Nash ▴ 20

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bioassayR ChemmineR PubChem

updated 5.7 years ago by Thomas Girke ★ 1.7k • written 5.7 years ago by Anthony Nash ▴ 20

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bioassayr chemmineR cheminformatics

5.8 years ago Anthony Nash ▴ 20

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keggrest chemminer fmcsr graph

written 6.7 years ago by Joris.Meys • 0

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chemminer

7.1 years ago jubilantsundar • 0

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chemminer

updated 7.4 years ago by Thomas Girke ★ 1.7k • written 7.5 years ago by Stane ▴ 40

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ChemmineR

7.7 years ago stephan.struckmann • 0

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ChemmineR ChemmineOB ChemmineTools Drug

7.8 years ago elisa.micarelli ▴ 10

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ChemmineR

updated 8.6 years ago by Thomas Girke ★ 1.7k • written 8.6 years ago by ረ • 0

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Network Clustering PROcess ChemmineR Network Clustering PROcess ChemmineR

11.7 years ago Thomas Girke ★ 1.7k

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Clustering ChemmineR Clustering ChemmineR

12.0 years ago Thomas Girke ★ 1.7k

15 results • Page 1 of 1

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Comment: Merge Replicates vs Mixed Model by abadgerw • 0

Thanks, @gabrielhoffman My understanding is that both options would still be mixed models: Even with technical replicates (3 wells per d…

Comment: Differential Expression Genes as Independent Variables by Dario Strbenac ★ 1.5k

Also, the reason why gene abundance is the dependent variable and is iterated over is that there are far more genes than there are samples …

Comment: rrvgo::calculateSimMatrix() error by Phila • 0

Thanks for sharing the solution. It helps me. [nced cloud][1] [1]: https://my-ncedcloud-login.us/

Comment: Merge Replicates vs Mixed Model by gabriel.hoffman ▴ 170

For your proteomics data, your normalization is correct. I had assumed it was RNA-seq because that is what I think about most. When using…

Comment: What type of counts data to import for performing Isoform analysis in edgeR by mohammedtoufiq91 ▴ 10

@gordonsmyth I will re-run Salmon with the --numGibbsSamples=50 option. Thank you.

Votes

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

Transcript-level differential expression using DESeq2

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

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