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ChemmineR
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
2.2 years ago
Sean
• 0
0
votes
1
reply
1.3k
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
4.2 years ago
adelenelai
• 0
0
votes
0
replies
1.9k
views
How to combined multiple *.mol files into a single *.sdf file using ChemmineR?
ChemmineR
Chemmin
ChemmineOB
4.4 years ago
sukissqz
• 0
3
votes
4
replies
1.8k
views
Error in ChemmineR function propOB() and ChemmineOB prop_OB()
ChemmineR
ChemmineOB
updated 4.7 years ago by
Thomas Girke
★ 1.7k • written 4.9 years ago by
teresadijor
• 0
2
votes
6
replies
1.8k
views
How to remove HCL mols in Chemminer
ChemmineR
Chemistry
updated 6.6 years ago by
khoran
▴ 10 • written 6.6 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
1.3k
views
Bioactivity assay DBs for cheminfo packages
bioassayR
ChemmineR
PubChem
updated 6.6 years ago by
Thomas Girke
★ 1.7k • written 6.6 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
1.2k
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
6.6 years ago
Anthony Nash
▴ 20
1
vote
4
replies
2.8k
views
How do I convert kegg info on drug to a format allowing me to calculate similarities?
keggrest
chemminer
fmcsr
graph
written 7.6 years ago by
Joris.Meys
• 0
0
votes
0
replies
1.2k
views
Downloading 3D compounds from Pubchem in ChemmineR
chemminer
8.0 years ago
jubilantsundar
• 0
1
vote
2
replies
2.1k
views
drawing chemical from smile 2D/3D
chemminer
updated 8.3 years ago by
Thomas Girke
★ 1.7k • written 8.3 years ago by
Stane
▴ 40
0
votes
0
replies
1.2k
views
Tversky' alpha and beta should not be int, should they?
ChemmineR
8.6 years ago
stephan.struckmann
• 0
0
votes
2
replies
1.9k
views
output of propOB function ChemmineR
ChemmineR
ChemmineOB
ChemmineTools
Drug
8.7 years ago
elisa.micarelli
▴ 10
0
votes
1
reply
2.4k
views
ChemmineR package - fpSim and cmp.similarity - Tanimoto kernels
ChemmineR
updated 9.5 years ago by
Thomas Girke
★ 1.7k • written 9.5 years ago by
ረ
• 0
0
votes
0
replies
1.4k
views
MCS & ChemineR
Network
Clustering
PROcess
ChemmineR
Network
Clustering
PROcess
ChemmineR
12.6 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.6k
views
ChemmineR Help
Clustering
ChemmineR
Clustering
ChemmineR
12.9 years ago
Thomas Girke
★ 1.7k
15 results • Page
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Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
dzv20413
• 0
Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…
Comment: Memory error while running alignments
by
Erik Wright
▴ 150
How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…
Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
Gabriel
• 0
Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …
Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
by
ubjw24
• 0
Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…
Comment: DESeq2 design for haplotype MPRA
by
Rita
• 0
Thank you very much, I appreciate it!
Votes
Comment: Check removeBatchEffect effectiveness
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
Answer: DESeq2 design for haplotype MPRA
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
Comment: Check removeBatchEffect effectiveness
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