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Circlize
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Circlize - Error: not enough space for cells at track index '5'.
circlize
2.5 years ago
lessismore
▴ 20
0
votes
2
replies
1.6k
views
Cytoband information for rice
rice
cytoband
circlize
ggbio
ideogram
6.8 years ago
Didi
▴ 10
0
votes
1
reply
1.1k
views
display of chromosomes (on the linear scale) and translocations
ggviz
ggplot2
gviz
circlize
Rcircos
5.8 years ago
Bogdan
▴ 670
0
votes
1
reply
891
views
Suggestion for circlize package in R for plotting the datasets
Circlize
4.2 years ago
sinha.puja
▴ 10
0
votes
1
reply
842
views
package circlize: How to extend circos plot?
circlize
circos
3.8 years ago
Brian Smith
▴ 120
0
votes
1
reply
831
views
R circlize package problem with drawing histogram
circlize
R
Circos
Plots
4.1 years ago
marvel479
• 0
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Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Comment: Store output of matchPWM()
by
mat149
▴ 70
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) : '…
Answer: Store output of matchPWM()
by
James W. MacDonald
65k
Something like this? ``` ind <- as.logical(sapply(hitlist, length)) out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) …
Answer: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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