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Diffbind
•
reset
0
votes
4
replies
243
views
Differential peaks that were not identified in diffbind were identified in diseq2
DiffBind
DESeq2
ATACSeq
21 days ago • updated 18 days ago
lonn
• 0
0
votes
3
replies
177
views
More regions in union when increasing DBA$config$mergeOverlap
DiffBind
7 days ago • updated 14 hours ago
Ian D.
▴ 70
2
votes
2
replies
172
views
[DiffBind] Obtaining normalization factors
DiffBind
26 days ago • updated 22 days ago
Henry
▴ 10
2
votes
2
replies
393
views
[Diffbind] Blacklist error: Error: Invalid Normalization and Unable to apply Blacklist/Greylist
DiffBind
Normalization
27 days ago • updated 26 days ago
Henry
▴ 10
0
votes
1
reply
141
views
ATACseq merge peaks
DiffBind
updated 12 days ago by
ATpoint
★ 4.1k • written 14 days ago by
Shloka
• 0
1
vote
1
reply
123
views
Fold change calculation in Diffbind vs. DESEQ2?
DiffBind
ChIPSeqData
DESeq2
updated 8 days ago by
Michael Love
42k • written 8 days ago by
marcusn
• 0
0
votes
0
replies
32
views
need help with Diffbind multiple groups
DiffBind
ChIPSeqData
2 days ago
Dinesh
• 0
0
votes
0
replies
55
views
DiffBind: no peaks in DBA object
DiffBind
macs2
chipseq
6 days ago
yvonneh
• 0
0
votes
0
replies
76
views
dba.plotProfile() plotting and interpretation
DiffBind
5 days ago
Henry
▴ 10
0
votes
0
replies
50
views
How to create consensus peak sets for each group to use in DiffBind?
DiffBind
6 days ago
Ian D.
▴ 70
0
votes
0
replies
96
views
Diffbind Error in socketConnection
DiffBind
Errorinsocketconnection
SpikeIn
23 days ago
Virangika
• 0
11 results • Page
1 of 1
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Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Mike Smith
★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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Michael Love
42k
Popular Question
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Haibo Liu
• 0
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HS
▴ 10
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DevelopingHippo
• 0
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Robert Castelo
★ 3.3k
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