Bioconductor EuroBioC

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Conference EuroBioC2024 Bioconductor Community EuroBioC

15 months ago Maria Doyle ▴ 110

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Europe Conference EuroBioC Events News

written 3.1 years ago by Maria Doyle ▴ 110

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talk workshop conference eurobioc poster

written 5.1 years ago by kevin.rue ▴ 350

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conference EuroBioc News

6.2 years ago • updated 6.1 years ago Laurent Gatto 1.6k

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Comment: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k

It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …

Comment: problem reading bam files into nucleR by efoss ▴ 10

I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…

Answer: two questions about limma by Gordon Smyth 53k

Answered here: https://support.bioconductor.org/p/16318/

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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Popular Question to jared.andrews07 ▴ 30

Popular Question to James W. MacDonald 68k