Bioconductor Exon

Showing : Exon • reset

vote

replies

1.1k

views

DEXSeq exon_definition exon

updated 16 months ago by Alejandro Reyes ★ 1.9k • written 16 months ago by zhangpeng1202 • 0

votes

replies

500

views

exon AnnotationHubData

18 months ago mahima.g • 0

votes

1.1k

views

splicing Exon featureCounts subread DEXSeq

2.5 years ago • updated 2.4 years ago NIK • 0

vote

824

views

DEXSeq exon

updated 2.6 years ago by Alejandro Reyes ★ 1.9k • written 2.6 years ago by jochen • 0

vote

replies

1.5k

views

DEXSeq exon memory dispersions estimateDispersions

4.5 years ago andreismolnikov00 • 0

vote

replies

1.6k

views

Annotatr CDS Exon UTR

updated 6.7 years ago by rcavalca ▴ 140 • written 6.7 years ago by xie186 • 0

votes

replies

3.1k

views

rsubread featurecounts exon mRNAseq

updated 7.4 years ago by Wei Shi ★ 3.6k • written 7.4 years ago by inah ▴ 10

votes

replies

2.0k

views

rnaseq exon quasr

updated 9.9 years ago by Steve Lianoglou ★ 13k • written 9.9 years ago by sven.schuierer • 0

8 results • Page 1 of 1

Recent ...

Replies

Comment: Problem at champ.load by andrew.gibbons • 0

I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…

Comment: ESTMATE, MCPcounter, EPIC, xCell input by Kang • 0

These are not, as far as I know, bioconductor packages. You should query on the websites for those specific software programs. @[mapquest][…

Comment: Robust way of dealing with low number of samples for Differential Gene Expressio by Kang • 0

I believe that pseudo-bulking is a strong way to approach DE, as long as it is possible to reliably identify the cell type across data and …

Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

Awards • All

Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k