Showing : GO • reset
0
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3
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4.1k
views
from RefSeq to GO terms / gene symbol to geneID
Proteomics Coverage Annotation GO Proteomics Coverage Annotation GO
18.5 years ago • updated 18.4 years ago Simon Lin ▴ 270
0
votes
1
reply
1.1k
views
goTools: ontoCompare question
GO topGO GO topGO
updated 18.4 years ago by ▴ 500 • written 18.4 years ago by ▴ 140
0
votes
5
replies
1.3k
views
normalization across sites
GO GO
updated 18.4 years ago by 21k • written 18.4 years ago by ★ 1.2k
0
votes
1
reply
947
views
limma design
Microarray GO affy limma PROcess Microarray GO affy limma PROcess
updated 18.4 years ago by ▴ 470 • written 18.4 years ago by 68k
0
votes
10
replies
2.7k
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dealing with NAs in limma
GO GO
updated 18.5 years ago by 53k • written 18.5 years ago by ★ 1.3k
0
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11
replies
2.5k
views
'recursive default argument' error in GOENTREZID2GO
GO Biobase genefilter graph Category GO Biobase genefilter graph Category
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ▴ 260
0
votes
4
replies
1.3k
views
cateGOry error
GO Category GO Category
updated 18.5 years ago by ★ 13k • written 18.5 years ago by ▴ 260
0
votes
0
replies
1.1k
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from RefSeq GI protein identifiers to GO terms
Proteomics Coverage GO Proteomics Coverage GO
18.5 years ago Lina Hultin-Rosenberg ▴ 80
0
votes
1
reply
776
views
Question about htmlReport() in GOstats package
GO GOstats GO GOstats
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ▴ 40
0
votes
0
replies
1.0k
views
problem with hyperGTest function
GO Cancer cdf GOstats GO Cancer cdf GOstats
18.5 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
1.3k
views
Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
18.5 years ago Seth Falcon ★ 7.4k
0
votes
3
replies
1.7k
views
limma: print-tip loess and empty spots
Normalization GO GUI limma limmaGUI Normalization GO GUI limma limmaGUI
18.5 years ago Gordon Smyth 53k
0
votes
0
replies
1.1k
views
Gene Ontology relationships
GO GO
18.5 years ago davidl@unr.nevada.edu ▴ 140
0
votes
1
reply
1.2k
views
GOstats v2.2.3 . bug in inducedTermGraph
Annotation GO GOstats Annotation GO GOstats
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ▴ 10
0
votes
9
replies
2.5k
views
problem with duplicateCorrelation and ExpressionSet objects
GO Survival cdf Biobase graph limma gcrma annaffy affyPLM simpleaffy biomaRt Category
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ★ 2.2k
0
votes
0
replies
693
views
ALERT: as sleep
GO GO
18.5 years ago Freddie Bentley ▴ 10
0
votes
0
replies
859
views
how to find the children identifiers of a specific KEGGidentifier in R??
Microarray Annotation Pathways GO Microarray Annotation Pathways GO
18.5 years ago Francois Pepin ★ 1.3k
1
vote
2
replies
1.1k
views
how to find the children identifiers of a specific KEGG identifier in R??
GO GO
updated 18.5 years ago by ★ 1.3k • written 18.5 years ago by ▴ 10
0
votes
2
replies
1.2k
views
Nimblegen data analysis
GO cdf affy oligo GO cdf affy oligo
updated 18.5 years ago by ▴ 140 • written 18.5 years ago by ★ 2.2k
0
votes
5
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2.5k
views
GOstats, geneCounts and gene universe filtering...
GO rat2302 probe GOstats topGO GO rat2302 probe GOstats topGO
updated 18.5 years ago by ★ 7.4k • written 18.6 years ago by ▴ 110
0
votes
0
replies
885
views
Open position
GO GO
18.6 years ago Shujian Wu ▴ 10
0
votes
1
reply
1.2k
views
HyperGTest Gene Universe problem
Annotation GO Annotation GO
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 20
0
votes
5
replies
2.1k
views
AnnBuilder with custmerized GO annotation
Annotation GO GOstats Annotation GO GOstats
updated 18.6 years ago by ▴ 870 • written 18.6 years ago by ▴ 120
0
votes
6
replies
1.9k
views
hyperGTest
GO Cancer GOstats Category GO Cancer GOstats Category
updated 18.6 years ago by ★ 6.0k • written 18.6 years ago by ★ 7.4k
0
votes
1
reply
707
views
GOstats hyperGTest( ): Counts of EntrezIDs returned from summary() are not same as the numbers of EntrezIDs extracted from probeSetSummary()
Microarray GO Cancer Microarray GO Cancer
18.6 years ago James W. MacDonald 68k
0
votes
0
replies
1.3k
views
Problem with customised endnode list in ontoCompare(goToolspackage)
Microarray GO graph goTools Category oligo Microarray GO graph goTools Category oligo
18.6 years ago Paquet, Agnes ▴ 500
0
votes
3
replies
1.7k
views
Annotation of U95av2 array
Microarray Genetics Annotation GO Cancer hgu95av2 probe affy AnnBuilder PROcess Genetics
updated 18.6 years ago by ▴ 870 • written 18.6 years ago by 68k
0
votes
1
reply
614
views
GOstats on cDNA microarray
Microarray GO Microarray GO
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 10
0
votes
0
replies
1.4k
views
RBGL: bfs & dfs with directed graphs
GO Biobase annotate geneplotter graph Rgraphviz annaffy RBGL convert GO Biobase graph
18.6 years ago stephen edwards ▴ 10
0
votes
2
replies
1.2k
views
steps to manually build AffyBatch object
GO affy affyio GO affy affyio
updated 18.6 years ago by 21k • written 18.6 years ago by ★ 1.2k
0
votes
3
replies
1.1k
views
HyperGTest and genelists
GO GO
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 140
0
votes
1
reply
1.1k
views
Problems in AnnBuilder package function ABPkgBuilder
Annotation GO rat2302 probe Biobase annotate AnnBuilder PROcess Annotation GO rat2302
updated 18.6 years ago by ▴ 870 • written 18.6 years ago by ▴ 70
0
votes
3
replies
1.5k
views
annotations for Codelink arrays
Annotation GO Cancer r10kcod probe AnnBuilder PROcess biomaRt codelink Annotation GO
updated 18.6 years ago by ▴ 760 • written 18.6 years ago by ★ 1.2k
0
votes
1
reply
946
views
GOStats question
GO GOstats GO GOstats
updated 18.6 years ago by 68k • written 18.6 years ago by ▴ 570
0
votes
3
replies
2.3k
views
Can't get RCurl...
GO Survival annotate genefilter affy graph limma GOstats biomaRt Category affycoretools
updated 18.6 years ago by 68k • written 18.6 years ago by ★ 2.2k
0
votes
2
replies
2.1k
views
"AveExp" column has dissappeared from limma topTable
GO Survival annotate geneplotter affydata limma annaffy affyPLM GO Survival annotate
updated 18.7 years ago by 53k • written 18.7 years ago by ▴ 680
0
votes
1
reply
1.4k
views
topTable "resort.by" broken...
GO Survival Biobase annotate genefilter affy affydata graph gcrma matchprobes annaffy
updated 18.7 years ago by 53k • written 18.7 years ago by ★ 2.2k
0
votes
1
reply
1.7k
views
question about limma2annaffy
GO Survival Biobase annotate genefilter geneplotter affy affydata graph limma annaffy
updated 18.7 years ago by 68k • written 18.7 years ago by ★ 2.2k
0
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0
replies
1.3k
views
suggestion about a split-plot factorial design with limma
GO limma GO limma
18.7 years ago Naomi Altman ★ 6.0k
0
votes
0
replies
1.4k
views
affy u133x3p chip
Microarray Genetics GO Preprocessing Cancer CGH cdf probe annotate genefilter affy RBGL
18.7 years ago Dick Beyer ★ 1.4k
0
votes
0
replies
743
views
SemSim GOCount question
GO Yeast GO Yeast
18.7 years ago Ariel Chernomoretz ▴ 170
0
votes
1
reply
950
views
Problem with the function hyperGtest from GOstats package
Annotation GO Cancer Annotation GO Cancer
updated 18.7 years ago by ▴ 210 • written 18.7 years ago by ★ 7.4k
0
votes
1
reply
878
views
NEwbie: How to determine significant enrichment differences of GO term vectors?
GO AnnBuilder GO AnnBuilder
updated 18.7 years ago by ★ 13k • written 18.7 years ago by ▴ 130
0
votes
0
replies
1.3k
views
verification
GO limma impute oligo makePlatformDesign crlmm GO limma impute oligo makePlatformDesign
18.7 years ago Vasiliki Xiarchou ▴ 10
0
votes
0
replies
1.9k
views
Options for spatial normalization? (Oliver Homann)
SNP Microarray Annotation Normalization GO Classification Cancer annotate geneplotter SNP
18.7 years ago Tarca, Adi ▴ 570
0
votes
1
reply
996
views
GOStats: HyperGTest question
GO GO
updated 18.7 years ago by ★ 7.4k • written 18.7 years ago by ▴ 130
0
votes
1
reply
1.1k
views
Normalization in davidTiling demo
Normalization GO Survival Biobase genefilter geneplotter affy vsn PROcess tilingArray GO
updated 18.7 years ago by ★ 13k • written 18.7 years ago by ★ 1.3k
0
votes
0
replies
4.8k
views
[R] object is not subsettable
GO Cancer annotate GO Cancer annotate
18.7 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
1.2k
views
What is a good method for analyzing differential expression from Illumina BeadStudio summary data?
Normalization GO affy vsn limma beadarray lumi Normalization GO affy vsn limma lumi
18.7 years ago Gordon Smyth 53k
0
votes
1
reply
1.3k
views
Normalization in davidTiling demo
Normalization GO Survival genefilter geneplotter affy vsn tilingArray affyio GO Survival
updated 18.7 years ago by ★ 13k • written 18.8 years ago by ★ 1.3k
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