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GO
•
reset
0
votes
0
replies
1.4k
views
MTP error
GO
Survival
multtest
affy
affydata
annaffy
affyPLM
affyio
GO
Survival
multtest
affy
18.0 years ago
Boel Brynedal
▴ 200
0
votes
0
replies
1.5k
views
FIRST ANNOUNCEMENT: IV International Course on Microarray Data Analysis
Microarray
Annotation
Normalization
GO
Visualization
Classification
Clustering
Survival
GO
18.0 years ago
Ana Conesa
▴ 340
0
votes
1
reply
1.0k
views
How to load annotation package dynamically?
Microarray
Proteomics
Annotation
GO
Microarray
Proteomics
Annotation
GO
updated 18.0 years ago by
James W. MacDonald
68k • written 18.0 years ago by
Chanchal Kumar
▴ 130
0
votes
2
replies
2.0k
views
how can I use the limma result as input in topGo
GO
limma
topGO
GO
limma
topGO
updated 18.1 years ago by
Adrian Alexa
▴ 400 • written 18.1 years ago by
Caroline Reiff
▴ 40
0
votes
0
replies
2.1k
views
Median-Interquartile Normalization
Microarray
SystemsBiology
Annotation
GO
Preprocessing
Clustering
Cancer
Yeast
Organism
GO
18.1 years ago
McGee, Monnie
▴ 300
0
votes
1
reply
1.2k
views
GOTERM
GO
GO
updated 18.1 years ago by
rgentleman
★ 5.5k • written 18.1 years ago by
mete@seas.upenn.edu
▴ 50
0
votes
1
reply
1.3k
views
GO analysis for time-series data
GO
GO
updated 18.1 years ago by
Ana Conesa
▴ 130 • written 18.1 years ago by
Srinivas Iyyer
▴ 600
0
votes
6
replies
2.1k
views
RMA vs gcRMA on 2 groups of samples
Normalization
GO
gcrma
Normalization
GO
gcrma
updated 18.1 years ago by
Naomi Altman
★ 6.0k • written 18.1 years ago by
Bogdan
▴ 670
0
votes
7
replies
1.6k
views
org.Dm.egACCNUM2EG
GO
GO
updated 18.1 years ago by
Marc Carlson
★ 7.2k • written 18.1 years ago by
Tiandao Li
▴ 260
0
votes
0
replies
937
views
Affymetrix quality control metrics with simpleaffy
GO
hgu133plus2
affy
GO
hgu133plus2
affy
18.1 years ago
Richard Friedman
★ 2.0k
0
votes
1
reply
1.6k
views
One-Color Agilent Data into Limma GUI
GO
limma
limmaGUI
GO
limma
limmaGUI
updated 18.1 years ago by
J.delasHeras@ed.ac.uk
★ 1.9k • written 18.1 years ago by
elliot harrison
▴ 230
0
votes
4
replies
2.0k
views
GOstats install error under Linux Debian
GO
GOstats
GO
GOstats
updated 18.1 years ago by
Marc Carlson
★ 7.2k • written 18.1 years ago by
Thomas Girke
★ 1.7k
0
votes
2
replies
1.4k
views
One-Color Aglent Data into Limma GUI
GO
GO
updated 18.1 years ago by
Martin Morgan
25k • written 18.1 years ago by
elliot harrison
▴ 230
0
votes
3
replies
1.8k
views
Biomart query in Web interface Vs. biomaRt package?
GO
PROcess
biomaRt
GO
PROcess
biomaRt
updated 18.1 years ago by
Steffen
▴ 500 • written 18.1 years ago by
J.J.P.Lebrec@lumc.nl
▴ 30
0
votes
1
reply
1.3k
views
combining data from two R arrays
GO
Survival
annotate
genefilter
vsn
tilingArray
GO
Survival
annotate
genefilter
vsn
18.1 years ago
Richard Harrison
▴ 70
0
votes
1
reply
2.9k
views
Venn Diagram for 2, 3 and 4 sets (can be extended for more)
GO
limma
GO
limma
updated 18.1 years ago by
Liqun He
▴ 20 • written 18.1 years ago by
Gordon Smyth
53k
0
votes
2
replies
1.6k
views
Venn Diagram for 2, 3 and 4 sets (can be extended for
GO
limma
GO
limma
updated 18.1 years ago by
Matt Settles
▴ 70 • written 18.1 years ago by
Dick Beyer
★ 1.4k
0
votes
4
replies
1.4k
views
Venn Diagram for 2, 3 and 4 sets (can be extended for more)
GO
limma
GO
limma
updated 18.1 years ago by
James W. MacDonald
68k • written 18.1 years ago by
Steffen Moeller
▴ 90
0
votes
2
replies
1.4k
views
AnnBuilder: problem with kegg url?
Annotation
GO
Organism
annotate
AnnBuilder
Annotation
GO
Organism
annotate
AnnBuilder
updated 18.2 years ago by
Marc Carlson
★ 7.2k • written 18.2 years ago by
Matthias E. Futschik
▴ 20
0
votes
0
replies
815
views
FW: how to 'bootstrap' expression data?
qPCR
GO
probe
qPCR
GO
probe
18.2 years ago
Johnstone, Alice
▴ 410
0
votes
7
replies
1.6k
views
Problem with GOPkgBuilder from AnnBuilder when trying to create an updated GO data package
GO
GO
updated 18.2 years ago by
Marc Carlson
★ 7.2k • written 18.2 years ago by
Stefan Goetz
▴ 30
0
votes
2
replies
1.2k
views
how to 'bootstrap' expression data?
qPCR
GO
qPCR
GO
updated 18.2 years ago by
Kasper Daniel Hansen
★ 6.5k • written 18.2 years ago by
Johnstone, Alice
▴ 410
0
votes
2
replies
1.6k
views
problem with probes2tableBM
Annotation
GO
Survival
hgu133a2
annotate
genefilter
affy
graph
gcrma
matchprobes
GOstats
updated 18.2 years ago by
Steffen
▴ 500 • written 18.2 years ago by
Mayte Suarez-Farinas
▴ 510
0
votes
4
replies
1.2k
views
Problem with invalid GO term in HyperGResult object - NOT solved
GO
Biobase
GO
Biobase
updated 18.2 years ago by
James W. MacDonald
68k • written 18.2 years ago by
Martin Morgan
25k
0
votes
0
replies
1.1k
views
Newbie Problems with Agilent data
GO
probe
limma
GO
probe
limma
18.2 years ago
elliot harrison
▴ 230
0
votes
10
replies
2.4k
views
Problem with invalid GO term in HyperGResult object - NOT solved
GO
Cancer
GOstats
affycoretools
GO
Cancer
GOstats
affycoretools
updated 18.2 years ago by
Jenny Drnevich
★ 2.2k • written 18.2 years ago by
Seth Falcon
★ 7.4k
0
votes
1
reply
1.3k
views
creating a copy number array data object in DNA copy
GO
marray
GO
marray
updated 18.2 years ago by
James W. MacDonald
68k • written 18.2 years ago by
jhs1jjm@leeds.ac.uk
▴ 230
0
votes
4
replies
2.6k
views
disagreement between biomaRt and topGO
GO
hgu133plus2
annotate
geneplotter
graph
Rgraphviz
PROcess
goTools
biomaRt
Category
GO
updated 18.2 years ago by
Steffen
▴ 500 • written 18.2 years ago by
Dick Beyer
★ 1.4k
0
votes
1
reply
1.5k
views
Getting top level GO category for a list of genes
GO
graph
biomaRt
GO
graph
biomaRt
updated 18.2 years ago by
Paquet, Agnes
▴ 500 • written 18.2 years ago by
Palle Villesen BiRC
▴ 10
0
votes
7
replies
2.3k
views
problem with GOstats, developmental version?
GO
Survival
hgu95av2
annotate
affy
affydata
graph
Rgraphviz
limma
gcrma
matchprobes
GO
updated 18.2 years ago by
Seth Falcon
★ 7.4k • written 18.2 years ago by
Jenny Drnevich
★ 2.2k
0
votes
5
replies
2.2k
views
Measuring similarities beween GO terms graphs
Annotation
GO
GOstats
Annotation
GO
GOstats
updated 18.2 years ago by
prsmra01@uniroma2.it
▴ 50 • written 18.2 years ago by
raffaele calogero
▴ 500
0
votes
1
reply
969
views
goTools: ontoCompare - GO list
GO
PROcess
GO
PROcess
updated 18.3 years ago by
Paquet, Agnes
▴ 500 • written 18.3 years ago by
Christelle Dantec
▴ 20
0
votes
6
replies
4.1k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation
GO
Survival
ExperimentData
cdf
DynDoc
genefilter
geneplotter
multtest
affy
GO
updated 18.3 years ago by
Weiyin Zhou
▴ 220 • written 18.3 years ago by
Jenny Drnevich
★ 2.2k
0
votes
0
replies
2.2k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation
GO
Survival
ExperimentData
cdf
DynDoc
genefilter
geneplotter
multtest
affy
GO
18.3 years ago
Min Wook Kim
▴ 20
0
votes
2
replies
1.5k
views
AnnBuilder questions
Annotation
GO
Yeast
hgu95av2
probe
geneplotter
AnnBuilder
Annotation
GO
Yeast
hgu95av2
updated 18.3 years ago by
Marc Carlson
★ 7.2k • written 18.3 years ago by
melany black
▴ 30
0
votes
1
reply
1.1k
views
Loop design -> inferring
GO
Clustering
limma
GO
Clustering
limma
updated 18.3 years ago by
Yannick Wurm
▴ 220 • written 18.3 years ago by
Gordon Smyth
53k
0
votes
2
replies
932
views
"all" category in annotation data
GO
probe
affy
GO
probe
affy
updated 18.3 years ago by
Hervé Pagès
16k • written 18.3 years ago by
Michael Newton
▴ 50
0
votes
1
reply
1.3k
views
html report of hyperGTest question
Pathways
GO
Pathways
GO
updated 18.3 years ago by
Seth Falcon
★ 7.4k • written 18.3 years ago by
Siarhei Manakou
▴ 100
0
votes
1
reply
566
views
usage of "all" category in annotation data
GO
probe
affy
GO
probe
affy
updated 18.3 years ago by
James W. MacDonald
68k • written 18.3 years ago by
Michael Newton
▴ 10
0
votes
0
replies
790
views
2x2 factorial in Limma
GO
limma
GO
limma
18.3 years ago
Mark W Kimpel
▴ 830
0
votes
1
reply
982
views
over-representation of specific transcription factors in gene lists
Transcription
Annotation
GO
Transcription
Annotation
GO
updated 18.3 years ago by
Seth Falcon
★ 7.4k • written 18.3 years ago by
Mark W Kimpel
▴ 830
0
votes
3
replies
1.3k
views
GO analysis code snippet
GO
GO
updated 18.3 years ago by
Seth Falcon
★ 7.4k • written 18.3 years ago by
Simon Lin
▴ 270
0
votes
10
replies
2.7k
views
comparing GO lists
Annotation
GO
Cancer
graph
GOstats
Annotation
GO
Cancer
graph
GOstats
updated 18.3 years ago by
Ana Conesa
▴ 130 • written 18.3 years ago by
rgentleman
★ 5.5k
0
votes
0
replies
1.0k
views
beadarray package: problem with bead level data
GO
beadarray
GO
beadarray
18.3 years ago
Krys Kelly
▴ 270
0
votes
0
replies
1.2k
views
Input for KS test
Genetics
GO
GOstats
Category
topGO
Genetics
GO
GOstats
Category
topGO
18.4 years ago
Ken Termiso
▴ 250
0
votes
3
replies
1.7k
views
GO terms not found in goTools and GO
GO
Biobase
annotate
goTools
biomaRt
GO
Biobase
annotate
goTools
biomaRt
updated 18.4 years ago by
Seth Falcon
★ 7.4k • written 18.4 years ago by
Lina Hultin-Rosenberg
▴ 80
0
votes
1
reply
836
views
go count
GO
GO
updated 18.4 years ago by
Seth Falcon
★ 7.4k • written 18.4 years ago by
Ariel Chernomoretz
▴ 170
0
votes
1
reply
761
views
Using current GO data with Bioconductor
GO
PROcess
GO
PROcess
updated 18.4 years ago by
Marc Carlson
★ 7.2k • written 18.4 years ago by
peter robinson
▴ 300
0
votes
1
reply
832
views
AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
GO
GO
updated 18.4 years ago by
Marc Carlson
★ 7.2k • written 18.4 years ago by
Nianhua Li
▴ 70
0
votes
1
reply
1.1k
views
AnnBuilder: ABPkgBuilder gives missing GO and NAs in ACCNUM
Annotation
GO
probe
annotate
AnnBuilder
Annotation
GO
probe
annotate
AnnBuilder
updated 18.4 years ago by
Marc Carlson
★ 7.2k • written 18.4 years ago by
Chuen Seng, Tan
▴ 10
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Answer: Post translational modifications and phosphoproteomics in limpa?
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