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GenomicRange
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Need Help w/ Subset on GRangesList
GenomicRange
GenomicRanges
3 months ago
mat149
▴ 70
0
votes
1
reply
746
views
DeSeq2 and GenomicRange installation possible conflict with bioconductor version 3.16?
DESeq2
version3.16
installation
bioconductor
GenomicRange
updated 17 months ago by
James W. MacDonald
66k • written 17 months ago by
hong
• 0
1
vote
11
replies
925
views
Finding genes with loss of Heterozygosity
genomicrange
updated 4.1 years ago by
Kevin Blighe
★ 3.9k • written 4.1 years ago by
AZ
▴ 30
5
votes
2
replies
563
views
Intersecting two big dataframe
genomicrange
intersect
updated 4.1 years ago by
James W. MacDonald
66k • written 4.1 years ago by
AZ
▴ 30
4 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Thank you so much!
Answer: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.0k
Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…
Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
minardsmitha
▴ 10
Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Votes
Comment: Ensembl plants at annotationHub?
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
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