Bioconductor MakeOrgPackageFromNCBI

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annotationforge makeorgpackagefromncbi

6.8 years ago gabciamm • 0

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AnnotationForge makeOrgPackageFromNCBI gene ontology edgeR pathwayanalysis

updated 12 months ago by L ▴ 50 • written 4.2 years ago by babak.loghmani ▴ 20

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annotation annotationforge annotationdbi makeorgpackagefromncbi

9.3 years ago oliver.tills • 0

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makeorgpackagefromncbi

updated 2.9 years ago by Vincent J. Carey, Jr. 6.7k • written 7.8 years ago by cagenet34 ▴ 20

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AnnotationForge makeOrgPackageFromNCBI

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by mat149 ▴ 70

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MakeOrgPackageFromNCBI NCBI SQL AnnotationForge

updated 4.0 years ago by James W. MacDonald 65k • written 4.0 years ago by chefer • 0

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342

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OrganismDbi makeOrgPackageFromNCBI

updated 3 months ago by James W. MacDonald 65k • written 3 months ago by dissikratzl • 0

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650

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makeOrgPackageFromNCBI

updated 14 months ago by James W. MacDonald 65k • written 14 months ago by irene.artuso • 0

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annotationforge makeOrgPackageFromNCBI

updated 4.2 years ago by James W. MacDonald 65k • written 4.2 years ago by lesneski • 0

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makeorgpackagefromNCBI s.pombe sqliteExecStatement

9.5 years ago Parham • 0

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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I looked into the genomic distributions. Please see the screenshot attatched ![ distrubution for female loci, boot1 and boot2][1] how do …

Answer: How to save the DEXSeq results by Michael Love 41k

If you look at the output here: https://bioconductor.org/packages/release/bioc/vignettes/DEXSeq/inst/doc/DEXSeq.html#4_Testing_for_differe…

Answer: Method to find pathways different between 2 groups by Robert Castelo ★ 3.3k

Hi, regarding how could you combine the result from each tool, one option is using a so-called "ensembl method", for instance, the package …

Answer: Couldn't connect to server while using "pathways" by James W. MacDonald 65k

As ATpoint already noted, you should proceed from the assumption that your audience knows nothing about what you are doing, and provide eno…

Answer: Trim/Filter out-of-bounds GRanges by Michael Love 41k

https://support.bioconductor.org/p/73432/#73448

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Answer: Method to find pathways different between 2 groups

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Answer: Method to find pathways different between 2 groups

Comment: Trying to use enrichGO

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