Bioconductor Medips

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ngsReports MEDIPS

9 weeks ago Researcher • 0

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MEDIPS

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by James • 0

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MEDIPS CpG

8 months ago greta • 0

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illimina 450k methylation qsea MEDIPS TCGA

updated 4 months ago by Matthias Lienhard ▴ 240 • written 7.1 years ago by justinburgener ▴ 20

4 results • Page 1 of 1

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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Marcel Ramos 690

`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…

Comment: error running enricher from clusterprofiler by Yael • 0

It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian

Comment: Create protein sequences including variants from a VCF file by Yun • 0

This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object

Comment: Can log2cpm be used for proteomics data normalization? by Daniel • 0

Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …

Votes

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Answer: Trim/Filter out-of-bounds GRanges

Comment: How to correctly adjust for gender in edgeR

Create protein sequences including variants from a VCF file

A: DEXSeq design formula

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