Bioconductor MetaVolcanoR

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limma MetaVolcanoR

2.5 years ago JAcky • 0

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MetaVolcanoR

updated 2.5 years ago by Kevin Blighe ★ 4.0k • written 2.5 years ago by JAcky • 0

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limma MetaVolcanoR EnhancedVolcano

2.6 years ago JAcky • 0

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Answer: library org.Hs.eg.db failing to install by James W. MacDonald 68k

It should just install. ``` > library(BiocManager) Bioconductor version 3.20 (BiocManager 1.30.25), R 4.4.1 (2024-06-14 ucrt) W…

Comment: Surprising behavior for DEXseq dispersion estimate plot? by Elijah • 0

Thank you so much for your quick reply! I was worried if some underlying technical artifact or unusual behavior would be causing the patter…

Answer: Surprising behavior for DEXseq dispersion estimate plot? by Michael Love 43k

The red points are just slowly moving toward -Inf. They tend to have variance < mean (if it were a simple design and you could just look at…

Answer: DESeq use in lipidomic analysis by Michael Love 43k

I would go for limma rather than a NB-based method. See the papers on limma for metabolomics / proteomics.

Answer: DiffBind - question on the use of filtered or unfiltered input data by robert • 0

[FFH4X][1] Injector is a Free Fire mod menu software that includes a variety of intriguing hack features such as aimbot, auto headshot, fly…

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Calculating TOM in blockwise WGCNA

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