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Multi-omics
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Job:
Computational Biology Contractor - Chinook Therapeutics
Patient_stratification
Multi-omics
RNA-seq
Kidney_Disease
21 months ago
eolson
• 0
0
votes
0
replies
744
views
Job:
Computational 4D and single-cell expression analysis of animal development and regeneration
multi-omics
imaging
single-cell analysis
Job
4.9 years ago
Wolfgang Huber
★ 13k
0
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0
replies
1.0k
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Job:
Research Fellow, Computational Multi-Omics of Cancer (University College London)
cancer
multi-omics
genomic instability
machine learning
data integration
Job
5.1 years ago
msecrier
▴ 20
2
votes
0
replies
989
views
Job:
Research Fellow, Computational Cancer Genomics (University College London)
cancer
genomics
machine learning
data integration
multi-omics
Job
5.2 years ago
msecrier
▴ 20
4 results • Page
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Votes
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
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