Bioconductor Neurodegeneration

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job genetics drug development neurodegeneration Job

7.7 years ago sandmann.t ▴ 70

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rna-seq computational biology cns disease gene expression data neurodegeneration Job

8.3 years ago mmartin ▴ 20

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rna-seq CNS Neurodegeneration statistics computational biology Job

9.2 years ago mmartin ▴ 20

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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by ATpoint ★ 5.0k

Yes, still it's not reproducible, yet hard to debug. I cannot reproduce myself either.

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening in a clean install

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Comment: limpa analysis advice

Answer: When to use edgeR or limma

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