Showing : genetics • reset
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
12 months ago António Miguel de Jesus Domingues ▴ 480
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0
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573
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
15 months ago Vincent J. Carey, Jr. 6.6k
2
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622
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Job: developer/project management position at Harvard Medical School
softwaredevelopment Job job cloudcomputing genetics
16 months ago • updated 11 months ago Vincent J. Carey, Jr. 6.6k
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0
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1.3k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
3.6 years ago • updated 14 months ago Luo Weijun ★ 1.5k
3
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6
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407
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Extremely big genes in annotation TxDb packages
annotation txdb AnnotationData Genetics
updated 19 months ago by 58k • written 19 months ago by ▴ 10
0
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1
reply
423
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DiffBind - Counting reads - counts not found
diffbind differential analysis genetics #chip-seq
updated 2.9 years ago by ★ 4.3k • written 2.9 years ago by • 0
0
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0
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454
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Job: Computational Biology / Genomics Internship at Denali Therapeutics
internship genomics genetics Job
2.9 years ago Steve Lianoglou 13k
0
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0
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309
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package for mismatch distribution?
genetics statistics
3.0 years ago myriam.croze07 • 0
1
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0
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545
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Job: 2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics genetics machine learning Job
3.2 years ago gagneur ▴ 10
0
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1
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461
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Normalization and Quality Control for Multiple scRNAseq Data Sets
normalization rnaseq genetics batch effect dropout
updated 3.3 years ago by 13k • written 3.3 years ago by • 0
0
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1
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481
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Get Gene IDs for a list of Gene Names in R
r bioinformatics org.Hs.eg.db genetics
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
1
vote
1
reply
457
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co-evolution analysis for RNA
genetics
3.7 years ago tg369 ▴ 40
2
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0
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539
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Job: Statistical Geneticist at Denali Therapeutics, South San Francisco, CA, USA
job genetics drug development neurodegeneration Job
3.7 years ago sandmann.t ▴ 70
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0
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629
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics job biostatistics genomics bioinformatics Job
3.8 years ago xzhousph • 0
1
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3
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865
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Gene ID Duplicates
deseq2 genetics Tutorial
updated 3.8 years ago by 58k • written 3.8 years ago by • 0
0
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4
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12k
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Normalization by DEseq
Genetics Normalization DESeq Genetics Normalization DESeq
updated 3.9 years ago by • 0 • written 11.3 years ago by ▴ 20
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0
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1.0k
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fisher exact test pairwise associations between gene mutations
genetics
4.4 years ago wasmetqall • 0
0
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0
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1.2k
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Job: Research Co-ordinator (Full Time)
genetics obesity molecular biology biomedical science Job
4.5 years ago njc65 • 0
0
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0
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733
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Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics genetics Job
4.7 years ago hong.lee • 0
0
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0
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941
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
5.0 years ago • updated 4.8 years ago Luo Weijun ★ 1.5k
0
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0
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900
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Job: Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics job genomics postdoc obesity Job
4.9 years ago njc65 • 0
0
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1
reply
733
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Extension to GoogleGenomics: getVariantCalls
GoogleGenomics genetics variants
5.0 years ago Vincent J. Carey, Jr. 6.6k
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0
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1.2k
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Job: Postdoc / Computational Biologist for circulating tumor DNA/RNA profiling at Memorial Sloan Kettering Cancer Center MSKCC, New York
cancer sequencing genetics genomes diagnostic Job
5.4 years ago dtlabmskcc • 0
0
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0
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578
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What statistical test is appropriate? 2 categorical independent variables, 3 categorical dependent variables, biological replicates
genetics
5.5 years ago efoss ▴ 10
0
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0
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640
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homologue gene conversion worm to human
biomaRt homologue annotation genetics
5.5 years ago Nemo ▴ 80
0
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0
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599
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Genetic Association analysis using four siblings among which three were affected and one was normal
genetics plink linkage disequilibrium
5.6 years ago li lilingdu ▴ 450
2
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0
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842
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Job: Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job GWAS genetics genomics neuro Job
5.6 years ago enridomenici ▴ 10
1
vote
1
reply
1.0k
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Question about EAGenes (TCGAbiolinks)
annotation cancer biomart genetics R
updated 5.9 years ago by ▴ 260 • written 5.9 years ago by • 0
1
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12
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2.4k
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Problem running summarizeOverlaps()
Genetics Genetics
updated 6.0 years ago by ▴ 10 • written 7.7 years ago by ▴ 140
0
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0
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1.1k
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Job: Calling all Clinical Genomic Scientist
computational biology genomics genetics Python java Job
6.6 years ago careers • 0
0
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1.1k
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Job: Come apply for our Epidemiologist, AncestryHealth role
genomics genetics design statistics scientist Job
6.6 years ago careers • 0
2
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0
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1.5k
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Job: 23andMe Job Opportunities
bioinformatician job bioinformatics scientist genetics Job
6.7 years ago rgentleman ★ 5.5k
1
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0
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1.5k
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Job: Bioinformatics / Biostatistics in genetic interaction analysis
high-throughput screening interactions genetics jobs image analysis Job
6.8 years ago Bernd Fischer ▴ 550
3
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5
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1.3k
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How to Find Common Dysregulated Genes in Two or More Sets of Microarray Data?
disease genetics micro array data microarray
updated 6.8 years ago by 44k • written 6.8 years ago by ▴ 20
0
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0
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1.6k
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Job: Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics genetics proteomics rnaseq microarray Job
6.9 years ago Feng Hong • 0
0
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1
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3.1k
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DESeq2 - factor base level changes the DE genes.
RNASeq Genetics DESeq2 RNASeq Genetics DESeq2
updated 7.3 years ago by 35k • written 7.5 years ago by ★ 12k
1
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1
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1.1k
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Question about decideTestsDGE()
Genetics edgeR
updated 7.3 years ago by 44k • written 7.5 years ago by ▴ 180
2
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0
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1.7k
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Job: Job Opening: Computational Biologist @ Genentech Bioinformatics
Job Sequencing Genetics Cancer
updated 7.4 years ago by ★ 8.2k • written 7.4 years ago by 11k
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3
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1.5k
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Error running makeTranscriptDbFromGFF in GenomicFeatures
Genetics TranscriptDb GenomicFeatures
updated 7.4 years ago by 11k • written 7.4 years ago by ▴ 180
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1.5k
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Plot exon number per gene and transcript lengths
Genetics TranscriptDb GenomicFeatures
7.4 years ago Jon Bråte ▴ 180
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8
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1.8k
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Expected number of DE genes?
Genetics edgeR DESeq2 Genetics edgeR DESeq2
updated 7.5 years ago by ▴ 750 • written 7.5 years ago by ▴ 140
0
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2
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829
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Can my problem be addressed with Bioconductor?
Genetics GOstats SNPchip topGO Genetics GOstats SNPchip topGO
updated 7.6 years ago by 58k • written 7.6 years ago by ★ 12k
0
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2
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1.3k
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UCSC data anomaly in 50638 transcript(s): the cds cumulative length is
Genetics GO Regression Cancer TranscriptDb Genetics GO Regression Cancer TranscriptDb
updated 7.7 years ago by ▴ 570 • written 7.7 years ago by 15k
0
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1
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1.1k
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limma: percent of variance explained
Genetics limma Genetics limma
updated 7.7 years ago by 44k • written 7.7 years ago by ▴ 90
0
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2
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763
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RNA-seq pathway analysis in Canis familiaris
RNASeq Genetics Annotation Canis familiaris gage RNASeq Genetics Annotation gage
updated 7.7 years ago by 58k • written 7.7 years ago by ▴ 140
0
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0
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998
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easyRNASeq: Number of total counts
GeneExpression RNASeq Genetics Coverage Normalization BSgenome Biobase Biostrings biomaRt
7.8 years ago Guest User ★ 12k
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1.1k
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Job: Bioinformatics Postdoc Position at the IMB, Mainz
Genetics DECIPHER Genetics DECIPHER
7.9 years ago Kathi Zarnack ▴ 110
0
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0
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822
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Statistical Bioinformatician/Geneticist in Oxford
Sequencing Genetics Sequencing Genetics
7.9 years ago Steve Taylor ▴ 280
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0
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719
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Conference Announcement - CAMDA 2014
Genetics Cancer Genetics Cancer
7.9 years ago Djork Clevert ▴ 210
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2
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813
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Error messege in edgeR: Error in t(y) + prior.count.scaled : non-conformable arrays
Genetics Genetics
updated 8.0 years ago by 44k • written 8.0 years ago by ▴ 10
50 results • Page 1 of 1
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Comment: Multi-factor paired RNAseq differential analysis with DEseq2 by swbarnes2 ▴ 970
You can have as many columns as you like in coldata, only those specified in the design will be used when you do the DESeq command So sur…
Comment: Multi-factor paired RNAseq differential analysis with DEseq2 by Matthew • 0
Thanks for the suggestion, I'll give that a try! Based on the PCA, all three factors do tend to influence the results, so I'll try the colu…
Comment: fgsea not downloading due to new r version. Is there a way around this? by amir.khan • 0
Seems to have done the trick and worked. thanks!
Comment: Multi-factor paired RNAseq differential analysis with DEseq2 by Michael Love 35k
Just to underscore swbarnes2 advice above, I'd also recommend discussing statistical design with a local statistician or someone familiar w…
Answer: Multi-factor paired RNAseq differential analysis with DEseq2 by swbarnes2 ▴ 970
First, I'd start by looking at all your samples in PCA. Does sex have a strong effect? Does it make sense to compare one tissue with anot…
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Answer: fgsea not downloading due to new r version. Is there a way around this?
Comment: Unable to install Rhtslib in R-4.1.1
Answer: fgsea not downloading due to new r version. Is there a way around this?
Answer: Swish with more than two conditions. Add support for contrasts?
Answer: ERROR: unable to find an inherited method for function ‘dispersions<-’ for signa
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