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NewWave
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Statistical test
NewWave
written 4 months ago by
mario
• 0
0
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1
reply
382
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Error in (function (classes, fdef, mtable) : Function 'raster' tag 'logical' cannot find an inheritance method
NewWave
updated 5 months ago by
shepherl
3.9k • written 5 months ago by
1135296741
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359
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error running exp2grn
NewWave
updated 7 months ago by
Fabricio Almeida-Silva
▴ 40 • written 8 months ago by
adriana
• 0
0
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0
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405
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featureCounts error Assertion failed: (NULL == pairer -> bam_margin_table -> appendix2), function SAM_pairer_finish_margin_table, file input-files.c,…
NewWave
7 months ago
Kilian
• 0
0
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2
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331
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Adding chromosome numbers to the respective gene ids of DESeq2 output file
NewWave
hgu133a2.db
updated 7 months ago by
ATpoint
★ 4.1k • written 7 months ago by
roy23032
• 0
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13
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Spam:
7z password remover tool
mgu74bv2cdf
NewWave
hgu133a2.db
10 months ago
roma
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13
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Spam:
ost to pst migration software
mgu74bv2cdf
NewWave
hgu133a2.db
10 months ago
roma
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2
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654
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Extracting DEG from topTags
NewWave
updated 10 months ago by
Gordon Smyth
50k • written 10 months ago by
liujy4
• 0
0
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1
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397
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How to use txtimport and do differential expression
NewWave
updated 11 months ago by
James W. MacDonald
65k • written 11 months ago by
SuASNAVASCH
• 0
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Yes, blockLength=200000, and seg=seg. I am concerned about the inter-feature distance of features. I generated this plot for various bloc…
Answer: Can I trust the differential expression analysis when the two groups overlap on
by
Michael Love
42k
Can you use `vst` instead of `rlog` and increase to 1000 or 2000 genes? I'm wondering if there's a way to characterize these 7 samples. …
Comment: Can I trust the differential expression analysis when the two groups overlap on
by
BioinfGuru
▴ 30
I think I am about to run into the same issue with my data, so I'll be interested to read peoples opinions on this also i.e. when the group…
Answer: How to approach time course RNAseq data? Seeing 80% DE genes in timepoint groups
by
Gordon Smyth
50k
The MDS plot shows that the time points are hugely different and whereas the replicate samples appear very consistent, with very low variat…
Answer: Store output of matchPWM()
by
mat149
▴ 70
hitlist<-lapply(irs, FUN = matchPWM, min.score="90%", with.score=TRUE, pwm = pwm) ot <- endoapply(hitlist, function(x) as(x, "IRanges")) …
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Comment: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
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