Bioconductor PCA scree plot

Showing : PCA scree plot • reset

0

votes

1

reply

1.1k

views

pca plot pca scree plot pca2go

updated 7.7 years ago by Steve Lianoglou ★ 13k • written 7.7 years ago by suranandbabu85 • 0

6

votes

4

replies

4.9k

views

pca deseq2 PCA scree plot

9.5 years ago CandiceChuDVM ▴ 40

2 results • Page 1 of 1

Recent ...

Replies

Answer: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k

The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

BTW, I tested with no issue on MacOS ARM on our previous github issue.

Votes

C: DESeq2 Following RSEM

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All

Popular Question to Istvan Albert ▴ 50

Popular Question to Dario Strbenac ★ 1.6k

Scholar to Nikos Ignatiadis ▴ 180