Bioconductor SJava

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SJava RWebServices

updated 9.6 years ago by Martin Morgan 25k • written 9.6 years ago by yinghao • 0

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1.1k

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Cancer RWebServices SJava CoGAPS CRImage Rsubread Cancer RWebServices SJava CoGAPS

12.0 years ago Day, Roger S ▴ 60

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1.1k

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limma biomaRt RWebServices IRanges microRNA SJava ChIPpeakAnno limma biomaRt RWebServices

updated 13.2 years ago by Dan Tenenbaum ★ 8.2k • written 13.2 years ago by MLSC MANIPAL ▴ 120

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1.0k

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RWebServices SJava RWebServices SJava

updated 14.2 years ago by Martin Morgan 25k • written 14.2 years ago by Michael Dondrup ▴ 550

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2.3k

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RWebServices SJava RWebServices SJava

14.3 years ago Michael Dondrup ▴ 550

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2.2k

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limma convert ArrayExpress SJava limma convert ArrayExpress SJava

updated 14.6 years ago by Martin Morgan 25k • written 14.6 years ago by Chris Fjell ▴ 60

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1.1k

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RWebServices SJava RWebServices SJava

updated 15.4 years ago by Martin Morgan 25k • written 15.4 years ago by Bastian Angermann ▴ 70

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782

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RMAGEML SJava RMAGEML SJava

updated 18.2 years ago by Steffen Durinck ▴ 420 • written 18.2 years ago by Vincent Bloch ▴ 10

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889

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RMAGEML PROcess marray SJava RMAGEML PROcess marray SJava

updated 19.1 years ago by Sean Davis 21k • written 19.1 years ago by Vincent J. Carey, Jr. 6.7k

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875

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RMAGEML SJava RMAGEML SJava

19.1 years ago Vincent J. Carey, Jr. 6.7k

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703

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SJava SJava

19.1 years ago Sean Davis 21k

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617

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RMAGEML SJava RMAGEML SJava

19.2 years ago Steffen Durinck ▴ 420

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1.4k

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SJava SJava

updated 19.6 years ago by Steffen Durinck ▴ 420 • written 19.6 years ago by Dipl.-Ing. Johannes Rainer ▴ 430

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741

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GO affy SJava GO affy SJava

20.4 years ago Chad Shaw ▴ 80

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745

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SJava SJava

updated 21.7 years ago by rgentleman ★ 5.5k • written 21.7 years ago by Weijia Zhang ▴ 10

15 results • Page 1 of 1

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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…

Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0

Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Comment: deseq2 results by swbarnes2 ★ 1.3k

Cross-posted https://www.biostars.org/p/9594331/#9594458

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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Teacher to Michael Love 42k