Bioconductor RWebServices

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1.6k

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biomart rwebservices

11.1 years ago Assa Yeroslaviz ★ 1.5k

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SJava RWebServices

updated 11.4 years ago by Martin Morgan 25k • written 11.4 years ago by yinghao • 0

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Cancer RWebServices SJava CoGAPS CRImage Rsubread Cancer RWebServices SJava CoGAPS

13.7 years ago Day, Roger S ▴ 60

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RWebServices RWebServices

updated 14.9 years ago by Martin Morgan 25k • written 14.9 years ago by MLSC MANIPAL ▴ 120

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limma biomaRt RWebServices IRanges microRNA SJava ChIPpeakAnno limma biomaRt RWebServices

updated 14.9 years ago by Dan Tenenbaum ★ 8.2k • written 14.9 years ago by MLSC MANIPAL ▴ 120

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RWebServices RWebServices

updated 16.0 years ago by Martin Morgan 25k • written 16.0 years ago by Michael Dondrup ▴ 550

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1.3k

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RWebServices SJava RWebServices SJava

updated 16.0 years ago by Martin Morgan 25k • written 16.0 years ago by Michael Dondrup ▴ 550

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3.3k

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RWebServices SJava RWebServices SJava

16.1 years ago Michael Dondrup ▴ 550

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1.6k

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RWebServices RWebServices

16.1 years ago Michael P Shipway ▴ 60

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861

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RWebServices RWebServices

updated 16.3 years ago by Martin Morgan 25k • written 16.3 years ago by Bastian A. ▴ 10

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RWebServices RWebServices

updated 16.8 years ago by Martin Morgan 25k • written 16.8 years ago by Michael P Shipway ▴ 60

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RWebServices SJava RWebServices SJava

updated 17.2 years ago by Martin Morgan 25k • written 17.2 years ago by Bastian Angermann ▴ 70

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RWebServices RWebServices

18.2 years ago BBS-noreply@bioconductor.org ▴ 10

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952

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Microarray RWebServices Microarray RWebServices

18.5 years ago Denise Scholtens ▴ 70

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1.4k

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Microarray RWebServices Microarray RWebServices

updated 18.6 years ago by Sachin Mathur ▴ 60 • written 18.6 years ago by Denise Scholtens ▴ 70

15 results • Page 1 of 1

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Comment: How to convert .raw data for use in xcms by a2a2asawhaa • 0

try converting your files to the older mzXML format, which remains highly stable for XCMS. While waiting for large datasets to process, you…

Comment: Which preprocessing steps are needed before running limpa? by miro165sabo • 0

Hi @gordonsmyth, thank you a lot for very fast and valuable response. I edited the question to provide more details.

Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ? by Gordon Smyth 53k

I tend to use dpcCN(), because it more robust than dpc() to experiments with lots of samples and big differences between samples. You coul…

Answer: Which preprocessing steps are needed before running limpa? by Gordon Smyth 53k

Please see the example limpa analyses given at <http://github.com/smythlab/limpa>, especially the kidney cancer case study. limpa does not…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Korneel • 0

Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…

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Answer: Which preprocessing steps are needed before running limpa?

Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?

Answer: Which preprocessing steps are needed before running limpa?

Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?

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Scholar to Gordon Smyth 53k

Popular Question to Peter Hickey ▴ 760