Bioconductor RWebServices

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biomart rwebservices

9.3 years ago Assa Yeroslaviz ★ 1.5k

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915

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SJava RWebServices

updated 9.6 years ago by Martin Morgan 25k • written 9.6 years ago by yinghao • 0

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Cancer RWebServices SJava CoGAPS CRImage Rsubread Cancer RWebServices SJava CoGAPS

11.9 years ago Day, Roger S ▴ 60

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RWebServices RWebServices

updated 13.1 years ago by Martin Morgan 25k • written 13.1 years ago by MLSC MANIPAL ▴ 120

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limma biomaRt RWebServices IRanges microRNA SJava ChIPpeakAnno limma biomaRt RWebServices

updated 13.1 years ago by Dan Tenenbaum ★ 8.2k • written 13.1 years ago by MLSC MANIPAL ▴ 120

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816

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RWebServices RWebServices

updated 14.2 years ago by Martin Morgan 25k • written 14.2 years ago by Michael Dondrup ▴ 550

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RWebServices SJava RWebServices SJava

updated 14.2 years ago by Martin Morgan 25k • written 14.2 years ago by Michael Dondrup ▴ 550

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RWebServices SJava RWebServices SJava

14.3 years ago Michael Dondrup ▴ 550

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RWebServices RWebServices

14.3 years ago Michael P Shipway ▴ 60

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657

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RWebServices RWebServices

updated 14.5 years ago by Martin Morgan 25k • written 14.5 years ago by Bastian A. ▴ 10

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RWebServices RWebServices

updated 15.0 years ago by Martin Morgan 25k • written 15.0 years ago by Michael P Shipway ▴ 60

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RWebServices SJava RWebServices SJava

updated 15.4 years ago by Martin Morgan 25k • written 15.4 years ago by Bastian Angermann ▴ 70

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823

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RWebServices RWebServices

16.4 years ago BBS-noreply@bioconductor.org ▴ 10

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732

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Microarray RWebServices Microarray RWebServices

16.7 years ago Denise Scholtens ▴ 70

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Microarray RWebServices Microarray RWebServices

updated 16.8 years ago by Sachin Mathur ▴ 60 • written 16.8 years ago by Denise Scholtens ▴ 70

15 results • Page 1 of 1

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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Votes

Answer: Dominance Index for Shotgun Metagenomics Data

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

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