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SequencingData
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News:
Course Manipulation of NGS Data for Genomic and Population Genetics Analyses
sequencing
Sequencing
SequencingData
19 months ago
communication
• 0
1
vote
1
reply
1.3k
views
Library sizes of miRNA sequencing data and TMM normalization with Edge-R
edgeR
SequencingData
miRNA
TMM
Normalization
updated 2.8 years ago by
Gordon Smyth
53k • written 2.8 years ago by
tleona3
• 0
0
votes
0
replies
983
views
Analysis of TIF-seq data to generate transcription start sites (TSS) and poly(A) site (PAS) clusters
Transcriptomics
SequencingData
3.0 years ago
Rom
• 0
0
votes
2
replies
1.1k
views
R/Bioconductor package for Circulating Cell-Free DNA data analysis
SequencingData
4.1 years ago • updated 4.0 years ago
adR
▴ 40
0
votes
3
replies
1.7k
views
package for ATACseq data analysis
SequencingData
ATACSeq
ATACseqQC
updated 3.2 years ago by
Rory Stark
★ 5.2k • written 4.1 years ago by
adR
▴ 40
0
votes
0
replies
1.0k
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
4.3 years ago
Negar
• 0
6 results • Page
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Answer: Important: Bioconductor Release 3.22 Delayed
by
oliviamillerama
• 0
I completely understand delays like this because technical issues can happen anytime. It feels a bit like [Draw Climber][1] when one small …
Comment: VariantAnnotation does escape = within header string quotes
by
Daniel Cameron
▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data
by
Alexander
• 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Comment: featureCounts -L: high unassigned:mapq fraction
by
eja.gssssssse.r.m
• 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Kevin Blighe
★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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James W. MacDonald
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