Bioconductor SequencingData

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sequencing Sequencing SequencingData

19 months ago communication • 0

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edgeR SequencingData miRNA TMM Normalization

updated 2.7 years ago by Gordon Smyth 53k • written 2.7 years ago by tleona3 • 0

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Transcriptomics SequencingData

3.0 years ago Rom • 0

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SequencingData

4.1 years ago • updated 4.0 years ago adR ▴ 40

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SequencingData ATACSeq ATACseqQC

updated 3.2 years ago by Rory Stark ★ 5.2k • written 4.1 years ago by adR ▴ 40

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SequencingData STR MutationalPatterns pedigree HapMap

4.3 years ago Negar • 0

6 results • Page 1 of 1

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Answer: Integration: Paired-end vs healthy single-end from a different source by wba64023 • 0

Interesting comparison! The source differences can definitely impact read quality and bias. Curious to see how you handle normalization bet…

Comment: Could we detect difference at pathway level but not significant different at gen by wba64023 • 0

thanks for sharing! [slope 2][1] [1]: https://slope2.online

Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40