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Slingshot
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Singlecell protein surface (ADT) pseudotime techniques
monocle
slingshot
2.3 years ago
EspressoKris
▴ 10
1
vote
7
replies
3.7k
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Error with slingshot slingPseudotime and slingCurveWeights after using fitGAM from tradeSeq
tradeSeq
slingshot
3.5 years ago
manduchi
▴ 10
2
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4
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3.2k
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slingshot: error with plot3d.SlingshotDataSet
slingshot
plot3d.SlingshotDataSet
updated 20 months ago by
Kelly Street
• 0 • written 3.6 years ago by
manduchi
▴ 10
0
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2
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1.3k
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Slingshot - residual_variance
Slingshot
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
Adrian Johnson
▴ 330
4 results • Page
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Comment: limpa analysis advice
by
Gordon Smyth
53k
Yes, we use Astral currently. The main dataset in the limpa preprint is Astral. I don't see any major problems with your data and I think …
Comment: limpa analysis advice
by
SamGG
▴ 360
Thank you for your comments. Please note that I did not apply any filtering to the peptide intensity. The experimental protocol includes tw…
Comment: Pairwise comparison of multiple groups with different base
by
ja569116
• 0
Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…
Comment: Are individual-mouse-based statistics possible in CellChat?
by
TikTsossakaas33ocissalpc
• 0
Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…
Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
by
ja569116
• 0
Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …
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Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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