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Slingshot
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Singlecell protein surface (ADT) pseudotime techniques
monocle
slingshot
6 months ago
EspressoKris
▴ 10
1
vote
7
replies
2.1k
views
Error with slingshot slingPseudotime and slingCurveWeights after using fitGAM from tradeSeq
tradeSeq
slingshot
21 months ago • updated 20 months ago
manduchi
▴ 10
2
votes
2
replies
1.7k
views
slingshot: error with plot3d.SlingshotDataSet
slingshot
plot3d.SlingshotDataSet
22 months ago
manduchi
▴ 10
0
votes
2
replies
709
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Slingshot - residual_variance
Slingshot
updated 4.0 years ago by
Martin Morgan
25k • written 4.0 years ago by
Adrian Johnson
▴ 330
4 results • Page
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Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Hi, Thank you very much for your answer. It's true that I only used 6 samples for this analysis, which is consistent with your explanation…
Comment: Error using champ.import
by
shilpa
• 0
I'm having same issues too. Did anyone manage to resolve it?
Answer: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
You don't explain how many samples you have (columns of data), but the warning message shown in your post would arise if there are in fact …
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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