Bioconductor TXT

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EdgeR normalization fastq txt TMM

updated 3.6 years ago by Gordon Smyth 53k • written 10.0 years ago by hamidrezarazzaghian • 0

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Affymetrix CEL TXT

updated 6.0 years ago by James W. MacDonald 68k • written 6.0 years ago by pbachali ▴ 50

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814

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read.table TXT

updated 6.1 years ago by James W. MacDonald 68k • written 6.1 years ago by ekl • 0

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Annotation GEO TXT

updated 6.1 years ago by Sean Davis 21k • written 6.1 years ago by ekl • 0

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Files TXT

updated 6.1 years ago by Gordon Smyth 53k • written 6.1 years ago by ekl • 0

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qPCRset object nondetects r package txt

updated 2.1 years ago by Nat.Nataren • 0 • written 7.9 years ago by s.m.may • 0

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r TXT codelink

10.4 years ago Agaz Hussain Wani ▴ 260

7 results • Page 1 of 1

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Comment: problem reading bam files into nucleR by efoss ▴ 10

I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…

Answer: two questions about limma by Gordon Smyth 53k

Answered here: https://support.bioconductor.org/p/16318/

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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