Bioconductor Affy

Showing : affy • reset

votes

views

affy

updated 7 days ago by James W. MacDonald 66k • written 10 days ago by pickingastar • 0

vote

replies

492

views

GEO affy

7 weeks ago Kurtis • 0

vote

replies

248

views

maplot_function rma_function ExpressionSet MicroarrayData affy

9 weeks ago • updated 8 weeks ago Mj.A. • 0

vote

replies

391

views

frmaTools affy

updated 3 months ago by James W. MacDonald 66k • written 3 months ago by michelafrancesconi8 • 0

votes

replies

2.1k

views

Pathways probe affy Pathways probe affy

written 17.7 years ago by mike Ad. ▴ 30

votes

replies

2.0k

views

Annotation affy oligo ffpe Annotation affy oligo ffpe

written 10.4 years ago by Guest User ★ 13k

votes

replies

2.2k

views

Bioconductor Install affy

updated 6 months ago by ATpoint ★ 4.2k • written 18 months ago by laujihen • 0

votes

665

views

crlmm hapmapsnp6 genomewidesnp6Crlmm affy

updated 11 months ago by Kevin Blighe ★ 3.9k • written 11 months ago by Vincent J. Carey, Jr. 6.7k

votes

replies

1.3k

views

affy affy

updated 12 weeks ago by Gordon Smyth 50k • written 19.1 years ago by SAURIN ★ 1.1k

votes

replies

1.4k

views

multtest affy multtest affy

updated 9 months ago by Amruta • 0 • written 20.7 years ago by Bob ▴ 20

10 results • Page 1 of 1

Recent ...

Replies

Answer: Counter-directional LFC shrinkage by Michael Love 42k

It's not just the average count but also the dispersion that affects apeglm. You can try ashr for another type of shrinkage.

Comment: Error in gseDO function by Javier • 0

Thank you for your answer! The thing is I'm working with 12 genes (I did also some targeted cholesterol efflux-related genes, but for sha…

Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)? by Ali Osman • 0

Thanks for your response and suggestions @atpoint ! I think implementation of the function is not a problem (I already have some options an…

Comment: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU by Marek Gierlinski ▴ 30

Two years on and the issue is still there. Thank you Arthur for the solution!

Comment: Cannot install oligo on Fedora by mbassal • 0

so whats the solution for this error?

Votes

A: DESeq2: add annotations (from data frame) to DESeqDataSet

Answer: Error in gseDO function

Comment: what the test method for enrichGO in clusterProfiler?

A: Comparison between two different group's pathway analysis results

DiffBind Batch Effect

Awards • All