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affy
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reset
0
votes
11
replies
2.1k
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globaltest question
Pathways
probe
affy
Pathways
probe
affy
written 17.7 years ago by
mike Ad.
▴ 30
0
votes
5
replies
2.0k
views
Normalizing Affy Almac Xcel Array Data from CEL files
Annotation
affy
oligo
ffpe
Annotation
affy
oligo
ffpe
written 10.4 years ago by
Guest User
★ 13k
0
votes
6
replies
1.3k
views
LIMMA : design (1, 2, 3, 3 ) , I got EXCITING results, what could be the logic, since i have 2 replicates for 3rd group only ?
affy
affy
updated 12 weeks ago by
Gordon Smyth
50k • written 19.1 years ago by
SAURIN
★ 1.1k
1
vote
10
replies
492
views
Obtaining pheno data from CEL files
GEO
affy
7 weeks ago • updated 6 weeks ago
Kurtis
• 0
0
votes
6
replies
2.2k
views
Error when Installing BioConductor Package ('affy')
Bioconductor
Install
affy
updated 6 months ago by
ATpoint
★ 4.2k • written 18 months ago by
laujihen
• 0
0
votes
1
reply
98
views
ERROR; return code from pthread_create() is 22
affy
updated 7 days ago by
James W. MacDonald
66k • written 9 days ago by
pickingastar
• 0
1
vote
3
replies
391
views
frma normalization
frmaTools
affy
updated 3 months ago by
James W. MacDonald
66k • written 3 months ago by
michelafrancesconi8
• 0
0
votes
2
replies
1.4k
views
Minimum expression threshold?
multtest
affy
multtest
affy
updated 9 months ago by
Amruta
• 0 • written 20.7 years ago by
Bob
▴ 20
1
vote
2
replies
248
views
Problem with maplot {affy} method when using rma {affy} method output as its input
maplot_function
rma_function
ExpressionSet
MicroarrayData
affy
8 weeks ago
Mj.A.
• 0
0
votes
1
reply
664
views
affy package and SNP arrays
crlmm
hapmapsnp6
genomewidesnp6Crlmm
affy
updated 11 months ago by
Kevin Blighe
★ 3.9k • written 11 months ago by
Vincent J. Carey, Jr.
6.7k
10 results • Page
1 of 1
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Replies
Comment: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU
by
Marek Gierlinski
▴ 30
Two years on and the issue is still there. Thank you Arthur for the solution!
Comment: Cannot install oligo on Fedora
by
mbassal
• 0
so whats the solution for this error?
Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
by
ATpoint
★ 4.2k
I don't have an answer to the "why" but maybe a simple reimplemention will do: ```r seqs <- c("ATCATCGTATCAAAGTC", "AAAACGTATCAAAGTC", "TG…
Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
by
Guido Hooiveld
★ 4.0k
After checking `?DESeqDataSetFromMatrix` note this information: arguments provided to SummarizedExperiment including rowRanges and met…
Answer: Error in gseDO function
by
Guido Hooiveld
★ 4.0k
Yes, you are missing something. :-) For a GSEA you will need to use as input all genes that you are analyzing; these genes should be ran…
Votes
A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
A: DiffBind Batch Effect
A: DiffBind Batch Effect
C: DiffBind Batch Effect
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Robert Castelo
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to
kevin.rue
▴ 350
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to
Wei Shi
★ 3.6k
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to
Gordon Smyth
50k
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to
jovel_juan
▴ 30
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