Bioconductor Analyst

Showing : analyst • reset

0

votes

0

replies

1.2k

views

bioinformatics ngsReports NGS analyst science

2.7 years ago marisona.almazan • 0

0

votes

0

replies

1.2k

views

job bioinformatics research scientist analyst Job

5.6 years ago deanpett ▴ 30

0

votes

0

replies

1.1k

views

analyst bioinformatics Job

6.7 years ago careers • 0

0

votes

0

replies

1.8k

views

microbiome epigenomics bioinformatics analyst NGS Job

7.6 years ago Jenny Drnevich ★ 2.0k

4 results • Page 1 of 1

Recent ...

Replies

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…

Comment: Join BOC Sciences at Drug Discovery Chemistry by teamardigen • 0

Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…

Votes

DESeq2 for candidate gene analysis

Join BOC Sciences at Drug Discovery Chemistry

Drug datasets for RNA-seq

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Awards • All