Showing : arrayQuality • reset
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maQualityPlots: cannot coerce type 'S4' to vector of type 'double'
arrayQuality arrayQuality
10.3 years ago Saket Choudhary ▴ 130
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hexbin package installation probs
hexbin arrayQuality hexbin arrayQuality
updated 16.7 years ago by 65k • written 16.7 years ago by ▴ 230
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issue in arrayQuality package
hexbin arrayQuality hexbin arrayQuality
19.3 years ago Longsi Ran ▴ 30
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arrayQuality - maQualityPlots - Error: duplicate switch defaults: 'list(dev =...' and ''
arrayQuality arrayQuality
updated 12.6 years ago by 25k • written 12.6 years ago by ▴ 20
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arrayQuality - maQualityPlots - Error: duplicate switch defaults: 'list(dev =...' and ''
arrayQuality arrayQuality
12.9 years ago Fabio Liberante ▴ 20
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bugs in arrayQuality and marray
Normalization Biobase hexbin arrayQuality marray Normalization Biobase hexbin arrayQuality
18.4 years ago Paquet, Agnes ▴ 500
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arrayQuality: error from maQualityPlots
arrayQuality
updated 9.1 years ago by 50k • written 17.2 years ago by ▴ 60
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maQualityPlots on Mac
GUI arrayQuality marray GUI arrayQuality marray
updated 17.7 years ago by ▴ 300 • written 17.7 years ago by 16k
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Agilent CGH data
CGH arrayQuality marray CGH arrayQuality marray
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 230
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Error using arrayQuality and Agilent txt files
arrayQuality arrayQuality
13.6 years ago F. Javier López ▴ 30
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Error message when running arrayQuality 1.0.9
arrayQuality marray arrayQuality marray
updated 19.3 years ago by ▴ 500 • written 19.3 years ago by ▴ 10
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marray and limma error with lmFit
Microarray Biobase DynDoc widgetTools limma arrayQuality marray convert Microarray DynDoc
17.0 years ago Paquet, Agnes ▴ 500
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problem using arrayQuality package
Normalization limma arrayQuality Normalization limma arrayQuality
updated 19.2 years ago by ▴ 500 • written 19.2 years ago by ▴ 510
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problem with arrayQuality in OSX 10.5
arrayQuality arrayQuality
updated 16.1 years ago by ▴ 130 • written 16.1 years ago by ▴ 50
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ArrayQuality package bug in agQuality function - marray package
Microarray arrayQuality Microarray arrayQuality
15.8 years ago Marcus Davy ▴ 680
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maQualityPlots: cannot coerce type 'S4' to vector of type
arrayQuality arrayQualityMetrics arrayQuality arrayQualityMetrics
10.3 years ago Agnes Paquet ▴ 30
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972
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RE: maQualityPlots (qpHexbin) question
hexbin arrayQuality hexbin arrayQuality
18.9 years ago Paquet, Agnes ▴ 500
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1
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880
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Questions on arrayQuality
Cancer arrayQuality Cancer arrayQuality
updated 19.8 years ago by ▴ 500 • written 19.8 years ago by ★ 2.0k
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MEEBO-tool in arrayQuality
GO arrayQuality GO arrayQuality
18.1 years ago Paquet, Agnes ▴ 500
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870
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can't get release hexbin source package
GO hexbin arrayQuality GO hexbin arrayQuality
19.5 years ago Darlene Goldstein ▴ 230
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maQualityPlots (qpHexbin) question
hexbin arrayQuality hexbin arrayQuality
18.9 years ago Rob J Goedman ▴ 40
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I would like to know how to run PRvQCHyb in arrayQuality
arrayQuality arrayQuality
17.2 years ago Wonjong Moon ▴ 80
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arrayQuality: Error: recursive default argument reference
arrayQuality arrayQuality
19.1 years ago vijayaraj nagarajan ▴ 80
23 results • Page 1 of 1
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Comment: Assist me in determining whether the analysis process using the limma package ha by SSSJec • 0
Thanks for your reply. I understand the principle of adjusted P-values, but I still want to address that issue. The description of the G…
Comment: Why p value inconsistent when using different number of pathway score? by Gordon Smyth 50k
Just a note that fgsea is not classical GSEA. The classical GSEA as described in the Subramanian paper and other papers from the Broad Inst…
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by Chris • 0
Thank you! The resource I use may mispresent the requirement input of fgsea.
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by alserg ▴ 260
fgsea doesn't require the presence of deferentially expressed genes, it takes as the input the differential expression-based ranking of all…
Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0
Thanks Robert for an educative response!
Votes
Answer: Improving the design matrices vignette in RNAseq123
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Comment: DESeq2: Contrast for two conditions combined versus one condition (A+B_vs_C)
Comment: Why p value inconsistent when using different number of pathway score?
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