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aucell
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Should I set a seed prior to running AUCell?
AUCell
updated 19 months ago by
ATpoint
★ 4.1k • written 19 months ago by
Lucy
▴ 60
2
votes
3
replies
769
views
Applicability of AUCell to bulk RNA-seq
AUCell
AUcell
10 months ago • updated 9 months ago
Lucy
▴ 60
2
votes
4
replies
1.1k
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 6.0 years ago by
sara.aibar
▴ 10 • written 6.0 years ago by
Xingyu
• 0
1
vote
5
replies
1.5k
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RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
jka8119
▴ 10
4 results • Page
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Answer: Errors in chromosome annotation-biomaRt
by
James W. MacDonald
66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat
by
James W. MacDonald
66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
66k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat
by
minardsmitha
▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons
by
boczniak767
▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
Votes
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
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