Showing : barplot • reset
2
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2
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1.1k
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padj-based gradient scale from barplot (clusterProfiler results) does not work properly
enrichplot barplot clusterProfiler
11 months ago Eva ▴ 10
0
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0
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716
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How to draw module significance barplot?
module_significance barplot WGCNA
24 months ago Sooni ▴ 10
0
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1
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3.0k
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how to sort y-axis category of GO result
GO.db clusterProfiler dotplot barplot
3.4 years ago Yang • 0
4
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2
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8.3k
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How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
clusterprofiler enrichGO barplot dotplot
6.5 years ago MAP ▴ 10
0
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2
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3.3k
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barplot with ggplot2 for gene expression
ggplot2 barplot gene expression gene expression
updated 9.5 years ago by 68k • written 9.5 years ago by ▴ 130
5 results • Page 1 of 1
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Comment: How to formulate 2 factor nested design in DESeq2 by Mariane • 0
Hi JK Kim, I'm having a problem similar to the one you reported. Could you please tell me how you solved this problem? Thanks
Comment: batch effect removal for agilent microarray data by gaye.yilmaz • 0
Thank you
Answer: Pathview visualisation not including positive log2 fold changes by James W. MacDonald 68k
Without providing a self-contained example, nobody can tell you if/where you went wrong. Since you get a KEGG pathway with some of the gene…
Comment: Differential variance analysis - can i use deseq2 by Marwan • 0
Thanks Michael for your answer, i didnt mean to use Deseq2 directly for the variance testing, but more like asking if using the (VST) data…
Answer: Differential variance analysis - can i use deseq2 by Michael Love 43k
We don't have a test of differential variance but other Bioconductor packages can, check similar posts (even on the right side bar) or use …
Votes
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
A: How to extract DESeq2 results for an interaction design
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
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