Showing : enrichGO • reset
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Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
enrichGO
10 weeks ago dailing57 • 0
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"No genes can be mapped...." using enrichGO in clusterProfiler
R TAIR clusterProfiler enrichGO Arabidopsis
updated 11 weeks ago by ★ 3.0k • written 11 weeks ago by • 0
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How to use EnrichGo of Cluster Profiler
EnrichGO clusterProfiler
updated 6 months ago by • 0 • written 6 months ago by • 0
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keytype not supported in clusterprofiler when it is ensembl IDs?
clusterProfiler enrichGO
updated 15 months ago by 57k • written 15 months ago by ▴ 20
2
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gene enrichment using enrichGO function throuth annotationHub orgDb
software error enrichGO annotationHub clusterProfiler Job
updated 15 months ago by 57k • written 15 months ago by • 0
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ClusterProfiler: enrichResult table with genes that do not have GO-term
ClusterProfiler enrichGO
updated 18 months ago by 57k • written 18 months ago by • 0
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How to select a specific onthology after runing enrichGO for all 3 onthology
enrichGO clusterprofiler
3.0 years ago MAP • 0
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How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
clusterprofiler enrichGO barplot dotplot
3.0 years ago MAP • 0
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610
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clusterProfiler enrichGO under-represented term
clusterProfiler enrichGO
3.8 years ago Francois Marchildon ▴ 20
9 results • Page 1 of 1
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Comment: Selecting pairs of exons from differentially spliced genes by jamie.gearing ▴ 40
That is fair enough. Sensible is always reassuring to hear! Thanks very much for your input Gordon. Best regards, Jamie.
Answer: Selecting pairs of exons from differentially spliced genes by Gordon Smyth 43k
Choosing a representative pair of exons is not part of our method, so we won't make any recommendations. You should choose the exons wit…
Comment: combineTwoExpressionSet from a4Base is not working properly by russ.bainer • 0
I ran across this bug as well- the issue is related to the code failing to reorder the ExpressionSet rows prior to merging. A workaround fo…
Comment: Best practice for quantifying sncRNA by Abhishek • 0
k has to be odd - trying 9, 21 instead
Comment: Best practice for quantifying sncRNA by Abhishek • 0
I did use the genome as decoy. And I used whole transcriptome from Gencode for indexing. Maybe I should index using just non coding transc…
Votes
Answer: Selecting pairs of exons from differentially spliced genes
Comment: Idea: Using DESeq2 to test a change in ratio of two genes
Time Series Analysis
Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels
Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels
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