Bioconductor BaseMean

Showing : baseMean • reset

votes

766

views

DESeq2 diferentialabundance 16srRNA baseMean

updated 2.4 years ago by Michael Love 43k • written 2.4 years ago by PhD_student_microbiome • 0

vote

replies

6.7k

views

basemean DESeq2

updated 3.0 years ago by ATpoint ★ 4.9k • written 3.4 years ago by msellabenton • 0

votes

replies

9.9k

views

deseq2 baseMean differential gene expression rnaseqgene

updated 6.6 years ago by swbarnes2 ★ 1.4k • written 6.6 years ago by melkile26 • 0

votes

replies

2.5k

views

deseq2 diffbind basemean summarizedexperiment

7.1 years ago rbronste ▴ 60

votes

1.2k

views

deseq results baseMean

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by batmaiden • 0

votes

1.7k

views

deseq2 baseMean cooks distance

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by da.de ▴ 30

6 results • Page 1 of 1

Recent ...

Replies

Comment: org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key by thundernight • 0

I'm actually having the same problem. [Spanish dictionary][1] [1]: https://spanishdictionary.cc

Comment: voomLmFit fitted log-CPM values by Gordon Smyth 52k

The fitted values are on the log2CPM scale. I would have told you if they were not! I think you may be getting confused by the differences…

Comment: voomLmFit fitted log-CPM values by Lina ▴ 10

Is the output from fitted(v) in the log2 CPM scale? or CPM scale?

Answer: voomLmFit fitted log-CPM values by Gordon Smyth 52k

Fitted values are obtained from limma MArrayLM objects by ``` fitted(v) ```

Comment: EuroBioC2024 abstract submission is open! by Finnianfly • 0

What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…

Votes

Answer: ROAST compare results with complex design

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

Awards • All