updated 3.6 years ago by
Jenny HT Lee
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written 4.7 years ago by
Assa Yeroslaviz
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Answer: help understanding limma
by
Gordon Smyth
45k
It is obvious that you haven't exported and read the correct intensity data, as you admit yourself in your question. I don't know what the …
Answer: performing the differential binding in ChIP-seq
by
etiennedanis
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DiffBind
https://bioconductor.org/packages/release/bioc/html/DiffBind.html
Comment: Transcript-level differential expression using DESeq2
by
Michael Love
36k
Did you see the part of the vignette where we talk about this?
https://bioconductor.org/packages/release/bioc/vignettes/fishpond/inst/doc/…
Comment: Transcript-level differential expression using DESeq2
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Ekta
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0
Hi Michael, thanks for your reply.
One more question. If the qvalue (and pvalue) for all DTEs are the same, the Volcano plot will look lik…
Comment: R: problem with running time-series analysis software: Mfuzz
by
soda
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80
I have solved this problem by myself. My data.frame is not suitable for Mfuzz.
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