Bioconductor Bionet

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bionet network

updated 8.4 years ago by branislav misovic ▴ 120 • written 8.4 years ago by enricoferrero ▴ 660

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bionet network

updated 8.4 years ago by branislav misovic ▴ 120 • written 8.4 years ago by enricoferrero ▴ 660

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BioNet plotModule

8.9 years ago cristina della beffa ▴ 30

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BioNet bioconductor affymetrixchip network analysis

9.7 years ago svlachavas ▴ 830

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Microarray Visualization Network BioNet Microarray Visualization Network BioNet

14.2 years ago Eva Benito Garagorri ▴ 70

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Comment: Handling Epic Array Data by Melisa Tecik • 0

Thank you so much for the clarification. As you said the replicates are the cells from different plates. For instance, both R01C01 and R05C…

Answer: Handling Epic Array Data by James W. MacDonald 67k

You don't need a sample sheet. It is just a simple way to identify the Idat files and possibly include sample information. But you appear t…

Comment: preprocessIllumina error with EPICv2 array by Rakesh • 0

Amazing, thanks for the help!

Answer: Allele frequencies for ALL alleles of one SNP ? by Robert Castelo ★ 3.4k

Hi, the [GenomicScores](https://bioconductor.org/packages/GenomicSCores) package provides supporting infrastructure to create annotation re…

Answer: preprocessIllumina error with EPICv2 array by James W. MacDonald 67k

You shouldn't need to change the annotation, and certainly not like that. You should never need to use the `@` function directly - there ar…

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Answer: preprocessIllumina error with EPICv2 array

Answer: UniProt.ws query loading indefinitely

Answer: Package needs internet access

Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela

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