Showing : biostrings • reset
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Biostrings error at retrieving protein sequences
SequenceMatching Biostrings DifferentialExpression Proteome
updated 7 months ago by 16k • written 7 months ago by • 0
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Biostrings: read*StringSet() functions leave open file handles
Biostrings
7 weeks ago • updated 6 weeks ago Gerhard Thallinger ▴ 180
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From a DNAStringSet to a data.frame
Biostrings
5 weeks ago ramiro.barrantes ▴ 10
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Trimming a section of a scaffold from a genome
Biostrings GenomeAssembly
updated 5 weeks ago by 65k • written 5 weeks ago by • 0
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AAbin vs DNAbin structures
Biostrings
updated 7 months ago by 65k • written 8 months ago by • 0
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Store output of matchPWM()
biostrings Biostrings
updated 23 hours ago by 65k • written 1 day ago by ▴ 70
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Probe off-target prediction: Identifying short sequence matches - potentially with mismatches & indels - in a transcriptome
Microarray Alignment Biostrings
written 12 months ago by ▴ 70
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How to search for a string in a DNAStringSet dataset?
Biostrings
3 months ago Angela Michalichyn • 0
8 results • Page 1 of 1
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Answer: DESeq2 v1.35.0 by Michael Love 41k
That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k
Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.
Answer: DESeq2 v1.35.0 by James W. MacDonald 65k
Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0
I tried also with oligo does not work, any other suggestion?
Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70
Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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