Showing : cghcall • reset
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How to combine CGHcall objects
cghcall r cgh copy number
8.5 years ago kitcurtius • 0
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CGHCall problems
aCGH probe DNAcopy aCGH CGHcall aCGH probe DNAcopy aCGH CGHcall
12.3 years ago Guest User ★ 13k
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4
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1.9k
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CGHcall and Normalization
Normalization CGHcall Normalization CGHcall
14.5 years ago Salih Tuna ▴ 30
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3
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2.0k
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CGHcall
CGHcall CGHcall
updated 14.5 years ago by 21k • written 14.5 years ago by ▴ 140
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1.2k
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CGHcall problem
CGH CGHcall CGH CGHcall
15.6 years ago Erik Dassi ▴ 10
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DNAcopy
aCGH impute DNAcopy aCGH snapCGH CGHcall aCGH impute DNAcopy aCGH snapCGH CGHcall
15.8 years ago Daniel Rico ▴ 110
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CGHregions error
Cancer CGHcall CGHregions Cancer CGHcall CGHregions
16.4 years ago Daniel Rico ▴ 110
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1.5k
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CGHcall error
aCGH Normalization Cancer aCGH CGHcall copynumber aCGH Normalization Cancer aCGH CGHcall
updated 17.2 years ago by ▴ 110 • written 17.2 years ago by ▴ 40
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CGHcall error
Cancer Organism MANOR oligo CGHcall BAC Cancer Organism MANOR oligo CGHcall BAC
updated 17.8 years ago by ★ 2.4k • written 17.8 years ago by ▴ 110
9 results • Page 1 of 1
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Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Answer: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR by efoss ▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma by Gordon Smyth 53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Votes
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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