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cheminformatics
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
8 months ago
Sean
• 0
0
votes
1
reply
821
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
2.7 years ago
adelenelai
• 0
1
vote
1
reply
901
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
5.2 years ago
Anthony Nash
▴ 20
3
votes
1
reply
691
views
Can limma/other DE algorithms be used for differential analysis of chemical descriptors?
limma
edger
deseq2
cheminformatics
updated 5.7 years ago by
Aaron Lun
★ 28k • written 5.7 years ago by
perdedorium
• 0
2
votes
3
replies
1.1k
views
cellHTS2 importa and analysing data from chemical compound screening
cellhts2
cheminformatics
updated 7.4 years ago by
Joseph Barry
▴ 160 • written 7.4 years ago by
Andreia Fonseca
▴ 810
1
vote
3
replies
1.9k
views
Bioc 3.3 Windows 10 eiR package fails to install
software error
R
cheminformatics
package installation
eiR
updated 7.9 years ago by
khoran
• 0 • written 7.9 years ago by
rjrich
• 0
0
votes
0
replies
1.2k
views
BioC 2013, July 17 (Developer Day) 18-19: 'Early' registration deadline July 1
Cheminformatics
Visualization
Cancer
Ovarian
DEXSeq
minfi
DESeq2
BaseSpaceR
epivizr
minfi
10.8 years ago
Martin Morgan
25k
0
votes
0
replies
1.3k
views
'Cheminformatics in R' workshop at the EBI: 17-18 May 2010
Metabolomics
Cheminformatics
Visualization
xcms
Metabolomics
Cheminformatics
Visualization
14.2 years ago
Gabriella Rustici
▴ 60
0
votes
0
replies
878
views
R/BioC workshops in Southern California
Cheminformatics
Clustering
Cheminformatics
Clustering
15.9 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
952
views
R/BioC workshops in Southern California
Cheminformatics
Clustering
Cheminformatics
Clustering
16.6 years ago
Thomas Girke
★ 1.7k
10 results • Page
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Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
• 0
Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Votes
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
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Rory Stark
★ 5.2k
Popular Question
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tangming2005
▴ 190
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Ian D.
▴ 70
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junhui.li11
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James W. MacDonald
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