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chemmineR
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
2.2 years ago
Sean
• 0
0
votes
1
reply
1.3k
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
4.2 years ago
adelenelai
• 0
0
votes
0
replies
1.9k
views
How to combined multiple *.mol files into a single *.sdf file using ChemmineR?
ChemmineR
Chemmin
ChemmineOB
4.4 years ago
sukissqz
• 0
3
votes
4
replies
1.8k
views
Error in ChemmineR function propOB() and ChemmineOB prop_OB()
ChemmineR
ChemmineOB
updated 4.7 years ago by
Thomas Girke
★ 1.7k • written 4.9 years ago by
teresadijor
• 0
2
votes
6
replies
1.8k
views
How to remove HCL mols in Chemminer
ChemmineR
Chemistry
updated 6.6 years ago by
khoran
▴ 10 • written 6.6 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
1.3k
views
Bioactivity assay DBs for cheminfo packages
bioassayR
ChemmineR
PubChem
updated 6.6 years ago by
Thomas Girke
★ 1.7k • written 6.6 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
1.2k
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
6.6 years ago
Anthony Nash
▴ 20
1
vote
4
replies
2.8k
views
How do I convert kegg info on drug to a format allowing me to calculate similarities?
keggrest
chemminer
fmcsr
graph
written 7.6 years ago by
Joris.Meys
• 0
0
votes
0
replies
1.2k
views
Downloading 3D compounds from Pubchem in ChemmineR
chemminer
8.0 years ago
jubilantsundar
• 0
1
vote
2
replies
2.1k
views
drawing chemical from smile 2D/3D
chemminer
updated 8.3 years ago by
Thomas Girke
★ 1.7k • written 8.3 years ago by
Stane
▴ 40
0
votes
0
replies
1.2k
views
Tversky' alpha and beta should not be int, should they?
ChemmineR
8.6 years ago
stephan.struckmann
• 0
0
votes
2
replies
1.9k
views
output of propOB function ChemmineR
ChemmineR
ChemmineOB
ChemmineTools
Drug
8.7 years ago
elisa.micarelli
▴ 10
0
votes
1
reply
2.4k
views
ChemmineR package - fpSim and cmp.similarity - Tanimoto kernels
ChemmineR
updated 9.5 years ago by
Thomas Girke
★ 1.7k • written 9.5 years ago by
ረ
• 0
0
votes
0
replies
1.4k
views
MCS & ChemineR
Network
Clustering
PROcess
ChemmineR
Network
Clustering
PROcess
ChemmineR
12.6 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.6k
views
ChemmineR Help
Clustering
ChemmineR
Clustering
ChemmineR
12.9 years ago
Thomas Girke
★ 1.7k
15 results • Page
1 of 1
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Replies
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…
Comment: Join BOC Sciences at Drug Discovery Chemistry
by
teamardigen
• 0
Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…
Votes
Join BOC Sciences at Drug Discovery Chemistry
Drug datasets for RNA-seq
Comment: Check removeBatchEffect effectiveness
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
Answer: DESeq2 design for haplotype MPRA
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