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clinicaldata
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Job:
Bioinformatics Scientist at NEXUS Personalized Health Technologies in Zurich
clinicaldata
translational
genomics
diagnostics
research
Job
7.7 years ago
Daniel Stekhoven
▴ 10
0
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1.2k
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Possible(validated) methodology implemented in R for integrating and analyzing clinical data with gene expression data in R
data integration
clinicaldata
gene expression data
PET
8.6 years ago
svlachavas
▴ 830
0
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0
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1.6k
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning
clinicaldata
biomarkers
data integration
bioconductor
9.0 years ago
svlachavas
▴ 830
3 results • Page
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Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
That did NOT really improve things...... Likely I wasn't clear enough, but with R-code I meant both the command you typed, as well as the o…
Comment: Trying to use enrichGO
by
fernanda.backsouza
• 0
Thank you for yout time guido, 1) When the pvalueCutoff = 1 nothing change. 2) output from `str(ortologos_filtrados)` data.frame': 14 obs…
Answer: Cannabis OrgDb
by
Guido Hooiveld
★ 3.9k
> library(AnnotationHub) > hub <- AnnotationHub() snapshotDate(): 2023-10-23 > query(hub, c("cannabis","orgdb") ) …
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
To increase readability: could you please reformat your post? Select the R--code, and click the `CODE` button... the 5th button.
Comment: Trying to use enrichGO
by
fernanda.backsouza
• 0
Thank you for yout time guido, 1) When the pvalueCutoff = 1 nothing change. 2) output from str(ortologos_filtrados) data.frame': 14 obs. …
Votes
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
Answer: OrgDb for maize
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