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clusterprofiler
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2
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203
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How many of my genes from my gene list are in each KEGG pathway?
Pathways
clusterProfiler
gseKEGG
KEGG
29 days ago • updated 28 days ago
julia_mcdonough
• 0
2
votes
13
replies
451
views
Trying to use enrichGO
clusterProfiler
GenomicDistributionsData
KEGG
19 days ago • updated 16 days ago
fernanda.backsouza
▴ 10
2
votes
2
replies
198
views
OrgDb for maize
clusterProfiler
OrgDb
biomaRt
Zea_mays
updated 22 days ago by
James W. MacDonald
65k • written 22 days ago by
sansan
• 0
1
vote
3
replies
874
views
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
clusterProfiler
RNASeq
updated 17 days ago by
Guangchuang Yu
★ 1.2k • written 14 months ago by
ruiqi.li
▴ 10
1
vote
2
replies
151
views
geneList error in clusterprofiler
clusterProfiler
GeneSetEnrichment
25 days ago
Ana
• 0
1
vote
1
reply
122
views
Cannabis OrgDb
KEGGgraph
org.Cs.eg.db
clusterProfiler
KEGG
AnnotationHubSoftware
updated 17 days ago by
James W. MacDonald
65k • written 18 days ago by
fernanda.backsouza
▴ 10
0
votes
1
reply
167
views
compareCluster dotplot: how to modify the genesets order
DOSE
enrichplot
clusterProfiler
updated 27 days ago by
Guido Hooiveld
★ 3.9k • written 4 weeks ago by
Lucie
• 0
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Answer: SingleR Label.Ont
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Denis
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[Jackpot City Casino][1] is the perfect option when looking for an online casino in Canada for an exciting vacation and huge winnings that …
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results
by
swbarnes2
★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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