Showing : ctc • reset
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ctc::hc2Newick branch length errors?
ctc ctc
12.8 years ago Narayanan, Manikandan NIH/NIAID [E] ▴ 60
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2
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Finding coding SNPs with predictCoding
SNP Annotation BSgenome ctc BSgenome cycle genomes SNP Annotation BSgenome ctc BSgenome
updated 13.8 years ago by ★ 1.7k • written 13.8 years ago by ★ 6.8k
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5
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1.9k
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Finding coding SNPs with predictCoding
SNP ctc SNP ctc
updated 13.9 years ago by ★ 1.7k • written 13.9 years ago by ★ 6.8k
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1
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1.1k
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Query regarding Clustering
Clustering ctc Clustering ctc
updated 15.7 years ago by ▴ 120 • written 15.7 years ago by 21k
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Queries on the 4x44PreProcess Package
Normalization ctc limma Agi4x44PreProcess Normalization ctc limma Agi4x44PreProcess
16.9 years ago Pedro López Romero ▴ 360
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1.4k
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Xcluster
Microarray ctc Microarray ctc
20.5 years ago Antoine Lucas ▴ 100
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:Export 1 way cluster to treeview
Clustering ctc Clustering ctc
21.1 years ago Anthony Bosco ▴ 500
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1.4k
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.3 years ago rgentleman ★ 5.5k
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.3 years ago Goeman, J.J. MSTAT ▴ 150
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1.4k
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Errors w/ getBioC(develOK =TRUE) with R2.0 devel
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.4 years ago Matthew Hannah ▴ 940
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1.4k
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Errors w/ getBioC()
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.4 years ago Matthew Hannah ▴ 940
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Updated ctc package available
ctc ctc
23.0 years ago Jeff Gentry ★ 3.9k
12 results • Page 1 of 1
Recent ...
Replies
Comment: Development of MSstat workflow to analyze DIA time series data by Gordon Smyth 53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
Comment: Clarification on counting in Rsubread (featureCounts) by Gordon Smyth 53k
Your follow-up question is very much wider than the first, and is essentially a research question rather a software question. As one of the…
Comment: Error in creating BSGenome package by Nguyen • 0
I keep running into this error, please help: ``` Writing all sequences to './BSgenome.Panubis.NCBI.Panubis1.0/inst/extdata/single_sequenc…
Comment: Joining different datasets and analyzing using the group-specific condition effe by James W. MacDonald 68k
There is an example of how you can do this in the [DESeq vignette][1]. An alternative would be to fit a linear mixed model using the `vari…
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
Awards • All
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Lluís Revilla Sancho ▴ 760
Commentator to James W. MacDonald 68k
Great Question to fl ▴ 20
Popular Question to Gordon Smyth 53k
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