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customcdf
•
reset
7
votes
6
replies
5.6k
views
How to use brainarray custom cdf with oligo package?
oligo
customcdf
HTA
frma
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
sanj
▴ 20
5
votes
4
replies
3.3k
views
How to use custom cdf "hgu133plus2hsentrezgcdf"?
customcdf
affymetrix microarrays
hgu133plus2
affy
6.4 years ago
rahil
▴ 30
3
votes
7
replies
1.7k
views
Oligo: cannot fit robust Probe Level linear Models / fitPLM when using a custom CDF
oligo
pdinfobuilder
pd.mogene.1.1.st
customcdf
updated 7.6 years ago by
James W. MacDonald
65k • written 8.1 years ago by
Guido Hooiveld
★ 4.0k
2
votes
1
reply
1.6k
views
BrainArray Custom CDFs and oligo
oligo
brainarray
rma
customcdf
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
lcordeiro
• 0
2
votes
3
replies
919
views
Using gcrma() and using the t-test to compare single genes of interest for disease vs healthy comparison?
gcrma
CustomCDF
Affyhgu133aExpr
limma
affy
updated 13 months ago by
James W. MacDonald
65k • written 13 months ago by
Pratik Mehta
▴ 10
1
vote
10
replies
5.2k
views
How to use brainarray custom cdf with any bioconductor package?
affy
oligo
customcdf
9.4 years ago • updated 9.1 years ago
rishi.dasroy
▴ 20
0
votes
0
replies
1.9k
views
Appropriate implementation of ComBat function for known batch effect correction and alternative methodologies of merging microarray datasets
sva
ComBat
customcdf
affymetrix microarrays
limma
8.3 years ago
svlachavas
▴ 830
0
votes
1
reply
852
views
Annotations of custom cdf files
customcdf
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
12021560-002
• 0
0
votes
3
replies
964
views
Custom cdf and Ensemble
customcdf
R
microarray
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
12021560-002
• 0
0
votes
7
replies
2.5k
views
How to use brainarray custom cdf for HTA platform?
hta
customcdf
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
pbachali
▴ 50
0
votes
2
replies
1.1k
views
Fixing brainarray repository link for mac os x
Annotation
GO
CustomCDF
cdf
gcrma
Annotation
GO
CustomCDF
cdf
gcrma
updated 14.4 years ago by
James W. MacDonald
65k • written 14.4 years ago by
Yair Benita
▴ 80
0
votes
5
replies
2.5k
views
Load CDF files for Affymetrix ST 2.0 microarrays
microarray
oligo
cdf
customcdf
updated 8.5 years ago by
Guido Hooiveld
★ 4.0k • written 8.5 years ago by
Nathaniel
▴ 20
0
votes
3
replies
1.3k
views
justRMA and wrong customCDFs causing segfault
justrma
customCDF
segfault
updated 5.3 years ago by
Daniel
▴ 10 • written 8.5 years ago by
maria.lehtivaara
• 0
13 results • Page
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by
damian.szk
▴ 80
Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…
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by
Patadù
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Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…
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