Bioconductor Hta

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votes

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959

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limma hta affy annotation

updated 4.7 years ago by James W. MacDonald 64k • written 4.7 years ago by RV ▴ 10

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2.3k

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hta customcdf

updated 6.8 years ago by James W. MacDonald 64k • written 6.8 years ago by pbachali ▴ 50

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1.2k

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hta pd.hta.2.0 hta20sttranscriptcluster.db

updated 7.4 years ago by James W. MacDonald 64k • written 7.4 years ago by giroudpaul ▴ 40

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5.3k

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oligo customcdf HTA frma

updated 8.2 years ago by James W. MacDonald 64k • written 8.2 years ago by sanj ▴ 20

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1.9k

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affy qc simpleaffy HTA

updated 8.7 years ago by James W. MacDonald 64k • written 8.7 years ago by Guilherme Rocha ▴ 40

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2.5k

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microarray affy hta 2.0 junction

9.0 years ago rbao.cri • 0

6 results • Page 1 of 1

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Answer: WGCNA documentation not available by James W. MacDonald 64k

Although people sometimes ask questions about WGCNA on this support site, it's not a Bioconductor package and therefore off-topic. Peter La…

Comment: ATACseqQC shiftGAlignmentsList() problem by Ou, Jianhong ★ 1.3k

try: `gal1 <- shiftGAlignmentsList(gal, outbam='3-AL1_Tn5_shift.bam')`. I will try to figure out why the memory is so high.

Comment: ATACseqQC shiftGAlignmentsList() problem by jfmay • 0

Thanks for your response. The version of ATACseqQC I'm using is 1.26.0. I tried to set bigFile=TRUE. The resulting object *gal1* still ends…

Answer: biomaRt_getBM_Failed to collect lazy table by James W. MacDonald 64k

That's an old bug that you should be able to fix by updating. I can't remember what package, although `db_collect` comes from `dbplyr` (and…

Comment: rDGIdb package inconsistency with web interface by christopherjamessteel1990 • 0

I went on https://www.dgidb.org/api and searched "RPS3A" and got the below result. Not sure how you got something different. There is certa…

Votes

Comment: DESeq2 - batch, condition and tissue information

Answer: ScRNAseq analysis scran :: quickcluster Error

Comment: Ensembl down???

Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and

Comment: Ensembl down???

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