Bioconductor DupRadar

Showing : dupRadar • reset

votes

replies

1.4k

views

dupradar rsubread

updated 5.7 years ago by Gordon Smyth 50k • written 5.7 years ago by b.nota ▴ 360

vote

replies

1.0k

views

dupRadar

updated 7.5 years ago by sergisayolspuig ▴ 80 • written 8.0 years ago by Gary ▴ 20

vote

1.1k

views

dupradar

updated 7.5 years ago by sergisayolspuig ▴ 80 • written 7.7 years ago by ekornobis ▴ 10

votes

839

views

dupRadar 150bp RNA-seq

updated 3.7 years ago by sergisayolspuig ▴ 80 • written 3.7 years ago by olegderyagin • 0

votes

replies

665

views

dupRadar

2.4 years ago Greta • 0

votes

replies

739

views

dupRadar

23 months ago Qingwei • 0

6 results • Page 1 of 1

Recent ...

Replies

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Votes

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length