Bioconductor FastMNN

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1.4k

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fastMNN SingleCellData BatchEffect batchelor

15 months ago José • 0

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1.9k

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scanpy scRNAseq fastmnn r

3.3 years ago Madiha • 0

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2.0k

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batchelor fastMNN scRNAseq

3.5 years ago Guandong Shang ▴ 40

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3.1k

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scater batchelor scRNAseq fastMNN

updated 3.5 years ago by Aaron Lun ★ 29k • written 3.5 years ago by Guandong Shang ▴ 40

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1.8k

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fastmnn batchelor BatchEffect

4.3 years ago p.joshi ▴ 40

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1.9k

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fastmnn scater batchelor

updated 5.6 years ago by Aaron Lun ★ 29k • written 5.6 years ago by ATpoint ★ 5.0k

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953

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fastMNN Interpretation

5.6 years ago mloza ▴ 10

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1.6k

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batchelor batch-correction mnncorrect fastmnn rna-seq

updated 5.8 years ago by Aaron Lun ★ 29k • written 6.4 years ago by firestar ▴ 20

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2.2k

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fastMNN CITE-seq ADT-seq batchelor REAP-seq

updated 5.8 years ago by Aaron Lun ★ 29k • written 5.8 years ago by sorjuelal • 0

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1.9k

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SCRAN fastMNN mnnCorrect

updated 7.5 years ago by Aaron Lun ★ 29k • written 7.5 years ago by tobi • 0

10 results • Page 1 of 1

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Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0

Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …

Votes

A: DESeq2 - VST eliminates zero values

Comment: Normalise to a housekeeping gene in DESEq2

Comment: limpa analysis advice

C: AnnotationForge makeOrgPackage rsqlite_send_query error

Answer: Limpa Pipeline Order

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Popular Question to James W. MacDonald 68k