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featurerequest
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Rsubread Read Bam and filter reads by TAG field
Rsubread
featurecounts
featurerequest
6.3 years ago
alessandro.pastore
▴ 20
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1.1k
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Tab on Main menu
bioconductor
featurerequest
updated 6.7 years ago by
Sean Davis
21k • written 6.7 years ago by
Justin Meskas
▴ 60
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Pull request for customProDB package
customProDB
featurerequest
updated 8.0 years ago by
Dan Tenenbaum
★ 8.2k • written 8.0 years ago by
matt.chambers42
▴ 10
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[ChIPseeker; feature request] More flexibility in specifying the TSS region
ChIPseeker
featurerequest
tss
updated 8.2 years ago by
Guangchuang Yu
★ 1.2k • written 8.2 years ago by
balwierz
▴ 40
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Feature Request: improve output when printing GenomicRanges instances
GenomicRanges
featurerequest
8.7 years ago
Keith Hughitt
▴ 180
5 results • Page
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Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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