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featurerequest
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Rsubread Read Bam and filter reads by TAG field
Rsubread
featurecounts
featurerequest
6.3 years ago
alessandro.pastore
▴ 20
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1.1k
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Tab on Main menu
bioconductor
featurerequest
updated 6.7 years ago by
Sean Davis
21k • written 6.7 years ago by
Justin Meskas
▴ 60
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1
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1.1k
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Pull request for customProDB package
customProDB
featurerequest
updated 8.0 years ago by
Dan Tenenbaum
★ 8.2k • written 8.0 years ago by
matt.chambers42
▴ 10
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1.3k
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[ChIPseeker; feature request] More flexibility in specifying the TSS region
ChIPseeker
featurerequest
tss
updated 8.2 years ago by
Guangchuang Yu
★ 1.2k • written 8.2 years ago by
balwierz
▴ 40
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1.1k
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Feature Request: improve output when printing GenomicRanges instances
GenomicRanges
featurerequest
8.7 years ago
Keith Hughitt
▴ 180
5 results • Page
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Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Comment: Too many significant genes when integrating gtex and tcga
by
Michael Love
41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Answer: Too many significant genes when integrating gtex and tcga
by
James W. MacDonald
65k
See `?results`, in particular the lfcThreshold argument.
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Votes
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
stuck on unimplemented type 'list' in 'EncodeElement'
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